BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15113 (UTR included)
(4768 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1213_C1 1562 0.0
>BF14_1213_C1
Length = 1230
Score = 1562 bits (788), Expect = 0.0
Identities = 794/796 (99%)
Strand = Plus / Plus
Query: 1988 gatggacatggagtccccagctgccggtgcacaaatactagcggccgagctccgtagtcg 2047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatggacatggagtccccagctgccggtgcacaaatactagcggccgagctccgtagtcg 60
Query: 2048 ctacgaggagctcttgtctccgtcggagggcgaggccccgggacaaaccccaggccgcat 2107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctacgaggagctcttgtctccgtcggagggcgaggccccgggacaaaccccaggccgcat 120
Query: 2108 gttgctgatggggttcagcggactgttcgcggccgtggagctccgagcgagggagctggc 2167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttgctgatggggttcagcggactgttcgcggccgtggagctccgagcgagggagctggc 180
Query: 2168 cgaccacctcgccgccccgctgcagcccgcctggaggaagatcgaccagatcaatgacgc 2227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgaccacctcgccgccccgctgcagcccgcctggaggaagatcgaccagatcaatgacgc 240
Query: 2228 catgcacatgtcggctgccatgcagaatcccgcgctgcgctccgtgctggaggatatctt 2287
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 241 catgcacatgtcggctgccatgcagagtcccgcgctgcgctccgtgctggaggatatctt 300
Query: 2288 cacggtgcggcgcgtgcagaccgtggcggaggtgttctctctgtgcctgcagctcgcccg 2347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cacggtgcggcgcgtgcagaccgtggcggaggtgttctctctgtgcctgcagctcgcccg 360
Query: 2348 cgccttccgcggctctcccccgcccgccgcgcctcctccgccccccgccgcctcacagcc 2407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgccttccgcggctctcccccgcccgccgcgcctcctccgccccccgccgcctcacagcc 420
Query: 2408 cctcctggacgacgccgcgctgtgtaaaccagtcagacgttttacggcggagtacgtgtc 2467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cctcctggacgacgccgcgctgtgtaaaccagtcagacgttttacggcggagtacgtgtc 480
Query: 2468 ccgctgtttcctgggcgtccactccctgtctctgggccgcgcgctgtgcctcctgctgcg 2527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccgctgtttcctgggcgtccactccctgtctctgggccgcgcgctgtgcctcctgctgcg 540
Query: 2528 gcgggcgcggctcgatctgcgcgccgaggtcgagcagaaggagatcggcgcctcctggag 2587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gcgggcgcggctcgatctgcgcgccgaggtcgagcagaaggagatcggcgcctcctggag 600
Query: 2588 cgtgtccctggagtctctggtggagaaggcctgcgggtccgtgtcgagtcgcgcggggtc 2647
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 601 cgtgtccctggagtctctggtggagaaggcctgcgggtccgtgtcgggtcgcgcggggtc 660
Query: 2648 cctcgccggagccttgcaggcgtcccgggcccgcacgctccgcgccgccgccgccgtgcg 2707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cctcgccggagccttgcaggcgtcccgggcccgcacgctccgcgccgccgccgccgtgcg 720
Query: 2708 cgccctggaccgtgcccgcgcctcggctcgcgccgcccgtctgcgcgccgccgcccacgc 2767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cgccctggaccgtgcccgcgcctcggctcgcgccgcccgtctgcgcgccgccgcccacgc 780
Query: 2768 cagtctacacgctgaa 2783
||||||||||||||||
Sbjct: 781 cagtctacacgctgaa 796
Score = 281 bits (142), Expect = 5e-75
Identities = 172/182 (94%), Gaps = 3/182 (1%)
Strand = Plus / Plus
Query: 2784 atcgtgtccggagcccccgaaccaggcccggcgttgttccgcgcggcccgggacctcacc 2843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1049 atcgtgtccggagcccccgaaccaggcccggcgttgttccgcgcggcccgggacctcacc 1108
Query: 2844 gccgcccggggacgactaactgacgccttggagaaggcacaggctctcctcacacccgca 2903
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1109 gccgcccggggacgactaactgacgccttggagaaggcacannctctcctcacacccgca 1168
Query: 2904 catca--gagtaaagtggggcgc-ggggcgaaccccgacctgctgggggcggtggtggcg 2960
||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1169 catcagngagtaaagnnnnncgcgggggcgaaccccgacctgctgggggcggtggtggcg 1228
Query: 2961 ct 2962
||
Sbjct: 1229 ct 1230
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 392,898
Number of extensions: 7737
Number of successful extensions: 7737
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7734
Number of HSP's successfully gapped: 2
Length of query: 4768
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4750
Effective length of database: 8,109,745
Effective search space: 38521288750
Effective search space used: 38521288750
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)