BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15116 (UTR included)
(1636 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031A1B04 1294 0.0
BF01061B1H02 743 0.0
>BF01031A1B04
Length = 714
Score = 1294 bits (653), Expect = 0.0
Identities = 700/719 (97%), Gaps = 15/719 (2%)
Strand = Plus / Plus
Query: 399 gaacacaattgtatttaacagttcctctgtgtcctattacatttaaaaattattctaaat 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gaacacaattgtatttaacagttcctctgtgtcctattacatttaaaaattattctaaat 70
Query: 459 attaaattataatattattaattagtttataaaataatcacaatgaattcagcaactcca 518
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 attaaattataatattattaattagtttataaaataatcacaatgaattcagcaact--- 127
Query: 519 ggtgtgcctcaggtgccgttgctcgacgatgacaccattgcctttggggaagaggataat 578
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ------------gtgccgttgctcgacgatgacaccattgcctttggggaagaggataat 175
Query: 579 gcgaataagcaatttgtccatccctacatagttttcttccacttggtgttccgaagtgct 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 gcgaataagcaatttgtccatccctacatagttttcttccacttggtgttccgaagtgct 235
Query: 639 gcagtggttgtatacatactctgtggctggttctcagactctttcatcgccagctttgtt 698
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 236 gcagtggttgtatacatactttgtggctggttctcagactctttcatcgccagctttgtt 295
Query: 699 ctagtcatattacttctctctgctgatttttggaccgtcaagaacatcagtggtagacta 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ctagtcatattacttctctctgctgatttttggaccgtcaagaacatcagtggtagacta 355
Query: 759 ctggtgggtctgagatggtggaactatgtggacgatgatgggaagtcccattgggtgttt 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ctggtgggtctgagatggtggaactatgtggacgatgatgggaagtcccattgggtgttt 415
Query: 819 gaatcgagacagagtcgtataaaccgtaacgagagccgtctgttctggatgggcctcatc 878
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 416 gaatcgagacagagtcgtataaaccgtaatgagagccgtctgttctggatgggcctcatc 475
Query: 879 ctgtgccctctcatctgggcgggattcttcatcatctgtctctttggacttaagtttaag 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ctgtgccctctcatctgggcgggattcttcatcatctgtctctttggacttaagtttaag 535
Query: 939 tggatgcttctagtgctgatagctctcaccctgacgggggccaacttgtacggttatatt 998
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 536 tggatgctcctagtgctgatagctctgaccctgacgggggccaacttgtacggttatatt 595
Query: 999 aaatgtaagttcggcgccaaggagaacttacaatcggcgaccacggacttcgtgaagaag 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 aaatgtaagttcggcgccaaggagaacttacaatcggcgaccacggacttcgtgaagaag 655
Query: 1059 cagctgttccagaacgcctcggcgttcatgttccctcagccggcgccgcccactaccgg 1117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 cagctgttccagaacgcctcggcgttcatgttccctcagccggcgccgcccactaccgg 714
>BF01061B1H02
Length = 814
Score = 743 bits (375), Expect = 0.0
Identities = 392/397 (98%), Gaps = 3/397 (0%)
Strand = Plus / Plus
Query: 948 ctagtgctgatagctctcaccctgacgggggccaacttgtacggttatattaaatgtaag 1007
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctagtgctgatagctctgaccctgacgggggccaacttgtacggttatattaaatgtaag 480
Query: 1008 ttcggcgccaaggagaacttacaatcggcgaccacggacttcgtgaagaagcagctgttc 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttcggcgccaaggagaacttacaatcggcgaccacggacttcgtgaagaagcagctgttc 540
Query: 1068 cagaacgcctcggcgttcatgttccctcagccggcgccgcccactaccgggaacacgggc 1127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cagaacgcctcggcgttcatgttccctcagccggcgccgcccactaccgggaacacgggc 600
Query: 1128 gtcgtgtagacgacggatcacgtgctccccgcccccgaccgggaacacggccgttataca 1187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtcgtgtagacgacggatcacgtgctccccgcccccgaccgggaacacggccgttataca 660
Query: 1188 aggacgcctatcctgtgttgatatatgtacattaaaataaattattaattatatgagcac 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aggacgcctatcctgtgttgatatatgtacattaaaataaattattaattatatgagcac 720
Query: 1248 actcattgacttcggtttgaataaaaaacataactttgtgaattatggattggaaaggaa 1307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 actcattgacttcggtttgaataaaaaacataactttgtgaattatggattggaaaggaa 780
Query: 1308 gacgacgacactctgaggggattgcattacagtagtc 1344
|||||||||||||||||||| |||||||||||||
Sbjct: 781 ---gacgacactctgaggggatttcattacagtagtc 814
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 229,879
Number of extensions: 5896
Number of successful extensions: 5896
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5893
Number of HSP's successfully gapped: 3
Length of query: 1636
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1619
Effective length of database: 8,119,229
Effective search space: 13145031751
Effective search space used: 13145031751
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)