BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15117 (UTR included)
(2635 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053B1D12 1582 0.0
>BF01053B1D12
Length = 836
Score = 1582 bits (798), Expect = 0.0
Identities = 816/825 (98%)
Strand = Plus / Plus
Query: 89 tgtagagaaacaacaatgtagtcactctactagtaatgattcatcccagagagataccag 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 tgtagagaaacaacaatgtagtcactctactagtaatgattcatcccagagagataccag 71
Query: 149 tgtgaaggagaggacctctcctgtgagttccgacagcaaaagtgatctggtcaagattgg 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 tgtgaaggagaggacctctcctgtgagttccgacagcaaaagtgatctggtcaagattgg 131
Query: 209 ttccgaccaaacctcgggtcatacctctggtgatgaactggagactgccacatcttctga 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ttccgaccaaacctcgggtcatacctctggtgatgaactggagactgccacatcttctga 191
Query: 269 catagaaatcattccgagcccaaacggcgaaagcagcaacggctgcagaaatagtccagg 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 catagaaatcattccgagcccaaacggcgaaagcagcaacggctgcagaaatagtccagg 251
Query: 329 aaaatatggcttcaaagcaaaagtagacggggccacttcacccaatcttgtagatttagt 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aaaatatggcttcaaagcaaaagtagacggggccacttcacccaatcttgtagatttagt 311
Query: 389 tttaggaaagagcctggcttctaagatacgcggacataatagagaattgtcagaagcctc 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tttaggaaagagcctggcttctaagatacgcggacataatagagaattgtcagaagcctc 371
Query: 449 gatacagagcaacaccagtgacgatagccagggttcagataatgataaactgatgcgaag 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gatacagagcaacaccagtgacgatagccagggttcagataatgataaactgatgcgaag 431
Query: 509 gttgtgtgagatgaccgagatcttagatgcgagagaatcgaggttgatggaggtcagccg 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gttgtgtgagatgaccgagatcttagatgcgagagaatcgaggttgatggaggtcagccg 491
Query: 569 gaataacgcggagctggccgaatgtaacgccagcctcaagagtcagatcgaaagtttact 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gaataacgcggagctggccgaatgtaacgccagcctcaagagtcagatcgaaagtttact 551
Query: 629 gaacaagcatgacggaggagacatcaacacgatcacagaggactacactcagaggatgtc 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gaacaagcatgacggaggagacatcaacacgatcacagaggactacactcagaggatgtc 611
Query: 689 cgctctggaaaagaagttccagcaggctatcagggagaaggatcaattgaggaagcagtt 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 cgctctggaaaagaagttccagcaggctatcagggagaaggatcaattgaggaagcagtt 671
Query: 749 agacaccttgaaatcggacacgacacgcaagaactcgtcggagctggagaacactataaa 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 agacaccttgaaatcggacacgacacgcaagaactcgtcggagctggagaacactataaa 731
Query: 809 ggagaaggacgagatgatctcccagctccaggaggagggagagaagctggcgaggcacga 868
||||||||||||||||||||||||||||||||| | || |||||||||||||||
Sbjct: 732 ggagaaggacgagatgatctcccagctccaggannnnngngannngctggcgaggcacga 791
Query: 869 gctgcagcacaccaacatcatcaagaaactacgcgctaaggaaaa 913
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 gctgcagcacaccaacatcatcaagaaactacgcgctaaggaaaa 836
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 241,668
Number of extensions: 5398
Number of successful extensions: 5398
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5398
Number of HSP's successfully gapped: 2
Length of query: 2635
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2618
Effective length of database: 8,119,229
Effective search space: 21256141522
Effective search space used: 21256141522
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)