BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15120 (UTR included)
(2212 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_981_C1 1156 0.0
BF01042B2F04 634 0.0
>BF14_981_C1
Length = 840
Score = 1156 bits (583), Expect = 0.0
Identities = 595/599 (99%)
Strand = Plus / Plus
Query: 318 aggtatcacagatgagagagaaaaggaaataagtataatgtgtgtacgaataaaatattt 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aggtatcacagatgagagagaaaaggaaataagtataatgtgtgtacgaataaaatattt 301
Query: 378 aatacgaaacagtgagcactcaaggcgagtggttttaaatgtaaagacaatgtgcgtgta 437
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 302 aatacgaaacagtgagcactcaacgcgagtggttttaaatgtaaagacaatgtacgtgta 361
Query: 438 aattcaaagacgacgtcgtatcagccggaaggggggtcgctggcgaccacgaccagctat 497
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aattcaaaaacgacgtcgtatcagccggaaggggggtcgctggcgaccacgaccagctat 421
Query: 498 ggtatggactttgtactgggcaatgacagtgatgagtggtggaacgcgacggagacgagt 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ggtatggactttgtactgggcaatgacagtgatgagtggtggaacgcgacggagacgagt 481
Query: 558 gcgccggacctctacaacttctgggcgtggagcatcgtggacggcgggctgatggtgctc 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gcgccggacctctacaacttctgggcgtggagcatcgtggacggcgggctgatggtgctc 541
Query: 618 atcatcagcggcaacacgctcaccgtcctcgccgtcaccatgagccgccgcctctcctcg 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 atcatcagcggcaacacgctcaccgtcctcgccgtcaccatgagccgccgcctctcctcg 601
Query: 678 ctcgtctccaaccagttcgtgctgaacctggccatatccgacctgatggtaggcctcacc 737
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 602 ctcgtctccaaccagttcgtgctgaacctggccatatccgacctgatggtgggcctcacc 661
Query: 738 ctgccctaccatctggtgttctacctcgacgacgatttcggcaagatcaagtggtcgtgc 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ctgccctaccatctggtgttctacctcgacgacgatttcggcaagatcaagtggtcgtgc 721
Query: 798 ttgatgaggttcatactcataatactcgcgtgcctcgcctccatctacaacatcatcgcc 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ttgatgaggttcatactcataatactcgcgtgcctcgcctccatctacaacatcatcgcc 781
Query: 858 atcgctgtagacagatacatcgccatcgtgcaccccctgcactacagccggtacatgac 916
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 atcgctgtagacagatacatcgccatcgtgcaccccctgcactacagccggtacatgac 840
>BF01042B2F04
Length = 795
Score = 634 bits (320), Expect = 0.0
Identities = 323/324 (99%)
Strand = Plus / Plus
Query: 868 acagatacatcgccatcgtgcaccccctgcactacagccggtacatgaccaagttggtga 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 acagatacatcgccatcgtgcaccccctgcactacagccggtacatgaccaagttggtga 531
Query: 928 ctcgtctcttgatgagcaccacctggacggtcgccgtatgcatcagctgtatccccatgt 987
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 532 ctcgtctcttgatgagcaccacctggacggtcgccgtatgcatcagctgtatacccatgt 591
Query: 988 tttggaacgattggcacagcggcgtcagttgcgaaatgaatgtcgtggtacctaaggagt 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tttggaacgattggcacagcggcgtcagttgcgaaatgaatgtcgtggtacctaaggagt 651
Query: 1048 acacaacgagcatcctggcacccatgttctctctcatctggatggtgatgttcgtgctgt 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 acacaacgagcatcctggcacccatgttctctctcatctggatggtgatgttcgtgctgt 711
Query: 1108 actggaggatatggcgagaggcgacctgtcacgcgaggaggatgagagccaacacctgct 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 actggaggatatggcgagaggcgacctgtcacgcgaggaggatgagagccaacacctgct 771
Query: 1168 gcccctccagcgctaatgactgga 1191
||||||||||||||||||||||||
Sbjct: 772 gcccctccagcgctaatgactgga 795
Score = 599 bits (302), Expect = e-171
Identities = 305/306 (99%)
Strand = Plus / Plus
Query: 566 cctctacaacttctgggcgtggagcatcgtggacggcgggctgatggtgctcatcatcag 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctctacaacttctgggcgtggagcatcgtggacggcgggctgatggtgctcatcatcag 60
Query: 626 cggcaacacgctcaccgtcctcgccgtcaccatgagccgccgcctctcctcgctcgtctc 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cggcaacacgctcaccgtcctcgccgtcaccatgagccgccgcctctcctcgctcgtctc 120
Query: 686 caaccagttcgtgctgaacctggccatatccgacctgatggtaggcctcaccctgcccta 745
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 121 caaccagttcgtgctgaacctggccatatccgacctgatggtgggcctcaccctgcccta 180
Query: 746 ccatctggtgttctacctcgacgacgatttcggcaagatcaagtggtcgtgcttgatgag 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccatctggtgttctacctcgacgacgatttcggcaagatcaagtggtcgtgcttgatgag 240
Query: 806 gttcatactcataatactcgcgtgcctcgcctccatctacaacatcatcgccatcgctgt 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gttcatactcataatactcgcgtgcctcgcctccatctacaacatcatcgccatcgctgt 300
Query: 866 agacag 871
||||||
Sbjct: 301 agacag 306
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 244,721
Number of extensions: 5749
Number of successful extensions: 5749
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5749
Number of HSP's successfully gapped: 3
Length of query: 2212
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2195
Effective length of database: 8,119,229
Effective search space: 17821707655
Effective search space used: 17821707655
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)