BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15130 (UTR included)
(2665 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01049A1C11 1532 0.0
>BF01049A1C11
Length = 800
Score = 1532 bits (773), Expect = 0.0
Identities = 793/800 (99%)
Strand = Plus / Plus
Query: 1019 ggacgcgttcgacatggacctgctggtgggggtgctgcagaggctgcgcgaggggaagaa 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggacgcgttcgacatggacctgctggtgggggtgctgcagaggctgcgcgaggggaagaa 60
Query: 1079 ggtcgaggtgcccatatacaactacgtgacgcactccagggagaacaggacgaaaacaat 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggtcgaggtgcccatatacaactacgtgacgcactccagggagaacaggacgaaaacaat 120
Query: 1139 gtacggtgcgaacgtcataatattcgagggtattctggcgttttataacacggaggtgct 1198
|||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 121 gtacggcgcgaacgtcataatatttgagggtattctggcgttctataacacggaggtgct 180
Query: 1199 gaagttgctggatatgaaggtgttcgttgacactgacgcggacatcaggctcgcgaggag 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaagttgctggatatgaaggtgttcgttgacactgacgcggacatcaggctcgcgaggag 240
Query: 1259 actgaggagagatatagtccaacgaggccgagacctcgaaggcgtcctgaagcagtacat 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 actgaggagagatatagtccaacgaggccgagacctcgaaggcgtcctgaagcagtacat 300
Query: 1319 gacgtacgtgaagccttcctaccagagttacatagcgccgtgcatggcacacgcggacat 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gacgtacgtgaagccttcctaccagagttacatagcgccgtgcatggcacacgcggacat 360
Query: 1379 tatagtgccgaggggcggagagaacaaggtggccatcagcctcatagtacaacacgtcca 1438
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 361 tatagtgccgaggggcggagagaacaaggtggccattagcctcatagtacaacacgtcca 420
Query: 1439 caaacaactacaactgcgaggcttcaaggtccgggagaagttggcggtggcgcacatagg 1498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caaacaactacaactgcgaggcttcaaggtccgggagaagttggcggtggcgcacatagg 480
Query: 1499 ccagccagtgccggactcgttgtacgtactcaaagataccccgcaggtccagggtctgca 1558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccagccagtgccggactcgttgtacgtactcaaagataccccgcaggtccagggtctgca 540
Query: 1559 cacgttcatccgcaacaaggacactccccgtgacgagttcatcttctactccaagcgtct 1618
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 541 cacgttcatccgcaacaaggacactccccgtgactagttcatcttctactccaagcgtct 600
Query: 1619 catgcgcctggtcatagagttcgccctgtccctcatgccctactccgaccactccgtgga 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 catgcgcctggtcatagagttcgccctgtccctcatgccctactccgaccactccgtgga 660
Query: 1679 cacgccgcaggggattccctacaccggtcggaagtgcgacgtggagaagatctgcggcgt 1738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cacgccgcaggggattccctacaccggtcggaagtgcgacgtggagaagatctgcggcgt 720
Query: 1739 gtccatcctcagggcgggagagacgatggagcaggccgtctgtgatgtttgtaaggacat 1798
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 721 gtccatcctcagggcgggaganacgatggagcaggccgtctgtgatgtgtgtaaggacat 780
Query: 1799 acggatcggaaagatcctca 1818
||||||||||||||||||||
Sbjct: 781 acggatcggaaagatcctca 800
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 258,561
Number of extensions: 4910
Number of successful extensions: 4910
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4910
Number of HSP's successfully gapped: 1
Length of query: 2665
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2648
Effective length of database: 8,119,229
Effective search space: 21499718392
Effective search space used: 21499718392
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)