BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15133 (UTR included)
(1525 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044B1F11 1201 0.0
>BF01044B1F11
Length = 640
Score = 1201 bits (606), Expect = 0.0
Identities = 621/626 (99%)
Strand = Plus / Plus
Query: 455 tgtcagtcgagaggtctgcaatttatagaaaaatttagattcaaatatggcgaaacgtat 514
|||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 15 tgtcggtcgagaggtctgcaatttatagaaaaatttagcttcaaatatggcgaaacgtat 74
Query: 515 aagccagagctctatcaactgggccgccctagccgagagggtccctgcggaacaaaagtc 574
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 75 aagccagagctctatcaactgggccgccctagccgagagggtccctgcagaacaaaagtc 134
Query: 575 gaacttagctgcttttaaagttaagtctgatggctaccttcgcagggtattggctagccc 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gaacttagctgcttttaaagttaagtctgatggctaccttcgcagggtattggctagccc 194
Query: 635 tccggagccaccaaagatcaactgggcaaattacaagcaggttgttcccatacccggcat 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 tccggagccaccaaagatcaactgggcaaattacaagcaggttgttcccatacccggcat 254
Query: 695 ggtggacaacttccaaaaacagtatgaagccctcaagatcccatacccctcggacaccat 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ggtggacaacttccaaaaacagtatgaagccctcaagatcccatacccctcggacaccat 314
Query: 755 gactgctaaggttgaggctcagtggggggaaattaagaaggccattgaatcatttgtcca 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gactgctaaggttgaggctcagtggggggaaattaagaaggccattgaatcatttgtcca 374
Query: 815 ggaatcaaacaaaaacattgctaaataccaacagcaaattgatgaactcaatgccctgct 874
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 375 ggaatcaaacaaaaacattgctaaataccaacagcaaattgatgagctcaatgccctgct 434
Query: 875 gccatacaaccagatgactctagaagacttcaaggatgcccaccctgaattggccattga 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gccatacaaccagatgactctagaagacttcaaggatgcccaccctgaattggccattga 494
Query: 935 ccccatcaataagccgaccttctggccgcacacaccagaggaacagccagactatgtcga 994
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ccccatcaacaagccgaccttctggccgcacacaccagaggaacagccagactatgtcga 554
Query: 995 ccccgaaaaaccagcacagagcggccactgaacaaatcatggcaatacacattcaataca 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ccccgaaaaaccagcacagagcggccactgaacaaatcatggcaatacacattcaataca 614
Query: 1055 agtgcattagatttttgtttgtgaaa 1080
||||||||||||||||||||||||||
Sbjct: 615 agtgcattagatttttgtttgtgaaa 640
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 184,694
Number of extensions: 3924
Number of successful extensions: 3924
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3924
Number of HSP's successfully gapped: 1
Length of query: 1525
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1508
Effective length of database: 8,119,229
Effective search space: 12243797332
Effective search space used: 12243797332
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)