BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15137 (UTR included)
(1594 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01002X1C09 1328 0.0
>BF01002X1C09
Length = 714
Score = 1328 bits (670), Expect = 0.0
Identities = 704/714 (98%), Gaps = 1/714 (0%)
Strand = Plus / Plus
Query: 625 taccggagtatgagccgttgattactggtctgccaacttttgtgaatgctggtgagcagg 684
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 taccggagtatgaaccgttgattactggtctgccaacttttgtgaatgccggtgagcagg 60
Query: 685 ctttggtcaactgtacttcagactactccctcccagcagccatcatagactggtttgtgg 744
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccttggtcaactgtacttcagactactccctcccagcagccatcatagactggtttgtgg 120
Query: 745 attccgaacctcaggaggatccggtaataactggggtaactcatgtctctggtgctgatg 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attccgaacctcaggaggatccggtaataactggggtaactcatgtctctggtgctgatg 180
Query: 805 gtgacgggctccgtgcgtcgtggcggactttgcacgtgttcccggacgactacgcaacac 864
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtgacgggctccgtgcgtcgtggaggactttgcacgtgttcccggacgactacgcaacac 240
Query: 865 accggggctacctcgcgcttcaatgtcgagcaactctccctacgagaccgccgcacatcc 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 accggggctacctcgcgcttcaatgtcgagcaactctccctacgagaccgccgcacatcc 300
Query: 925 gcagcatggctgtgaggctgttcgtcgctagcagaccacacatatcgtcttatatgttaa 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcagcatggctgtgaggctgttcgtcgctagcagaccacacatatcgtcttatatgttaa 360
Query: 985 gtaaaaataatgctgtgggtaaaagcagtgccattagattacaatatgaattgtttctat 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtaaaaataatgctgtgggtaaaagcagtgccattagattacaatatgaattgtttctat 420
Query: 1045 ggactttacttctggcggtgaggagacaagtgccttttctagtgaaataaatagtgacta 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggactttacttctggcggtgaggagacaagtgccttttctagtgaaataaatagtgacta 480
Query: 1105 gtatcggactcgagtacgtaaagctgtgacgtaatttttaacaaattttaatcctaagaa 1164
|||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 481 gtatcggactcgagtacgtaaagctgtgacgtaattttaaacaaatattaatcctaagaa 540
Query: 1165 ccatgttgtgtatgtatattttatttgcgatatataattgattgataattaataaaattt 1224
|||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccatattgtgtatgaatattttatttgcgatatataattgattgataattaataaaattt 600
Query: 1225 agataattcatatcgtttttttttc-aaacaggtagaatgtattatatttataatagctt 1283
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 601 agataattcatatcgtttttttttctaaacaggtagaatgtattatatttataatagcct 660
Query: 1284 cggttggtttgagttatttcttttgtaaaggcgatactatagactaaatggatt 1337
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cggttggtttgagttatttcttttgtaaaggcgatactatagactaaatggatt 714
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 211,936
Number of extensions: 4248
Number of successful extensions: 4248
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4247
Number of HSP's successfully gapped: 1
Length of query: 1594
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1577
Effective length of database: 8,119,229
Effective search space: 12804024133
Effective search space used: 12804024133
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)