BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15138 (UTR included)
(2045 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1008_C1 1620 0.0
BF01049B2H12 168 2e-41
BF01019A1H08 86 3e-16
BF01049B1F01 82 4e-15
BF14_335_C4 74 1e-12
>BF14_1008_C1
Length = 933
Score = 1620 bits (817), Expect = 0.0
Identities = 842/849 (99%), Gaps = 1/849 (0%)
Strand = Plus / Plus
Query: 226 aatactgattactgacattattgacaaatgacattttcaattcaaattgaactattgggc 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatactgattactgacattattgacaaatgacattttcaattcaaattgaactattgggc 60
Query: 286 accc-agatagcataacctacccattctttgatcgcatgtaaacatcaaacttcaaagta 344
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 accccagatagcataacctacccattctttgatcgcatgtaaacatcaaacttcaaagta 120
Query: 345 gaacgtgggagcgttgttgcgtgagtgagtactgacacagtcgaagccggttcaattata 404
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 121 gaacgtgggagcgttgttgcgtgagtgagtactgacacagtccaagccggttcaattata 180
Query: 405 aataatacgtaaataccgagtgcacttaattactgaaaatatttaatgacactaaatttt 464
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 181 aataatacgtaaataccgagtgcacttaattactgaaaatatttaatgactctaaatttt 240
Query: 465 cattaatttgtgataaaattaaaattacttttgaaaatgacgggaaagtttgttttttct 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 241 cattaatttgtgataaaattaaaattacttttgaaaatgacgggaaagtttgtttttgct 300
Query: 525 ggaaacttagtaacttcagatgtttctatgaagttaaagtgttttcgtggatatatagaa 584
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 301 ggaaacttagtaacttcagatgtttctatgaagttaaagtgttttcgcggatatatagaa 360
Query: 585 gtcgttgatggactgataacaaaaattggtaatatagaagagtttcaaaaacagattgat 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtcgttgatggactgataacaaaaattggtaatatagaagagtttcaaaaacagattgat 420
Query: 645 aattttagtgattcaaaagtagttacacttggagagaatgagtttttaatgccgggcttt 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aattttagtgattcaaaagtagttacacttggagagaatgagtttttaatgccgggcttt 480
Query: 705 gtggactgtcatactcatgcccctcaatatcccaacattggtctaggattggacctccca 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtggactgtcatactcatgcccctcaatatcccaacattggtctaggattggacctccca 540
Query: 765 ttgctcgaatggctcaataaatatacttttccactggaacgtcactacagtgatgcagaa 824
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttgctcgattggctcaataaatatacttttccactggaacgtcactacagtgatgcagaa 600
Query: 825 tttgctgctaatgtttatgacattgttgtgagaagattaattaacaatggcaccacaacg 884
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 601 tttgctgctaatgtttatgacatggttgtgagaagattaattaacaatggcaccacaacg 660
Query: 885 gcctgttattttggatccttacacttagaaggtacgatgaagctagtgaaatatgttgtt 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcctgttattttggatccttacacttagaaggtacgatgaagctagtgaaatatgttgtt 720
Query: 945 gagcacaaacaaagagcattggtgggaaaagtcagtatgaatgtagaaaatgatgctgga 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gagcacaaacaaagagcattggtgggaaaagtcagtatgaatgtagaaaatgatgctgga 780
Query: 1005 tactataacaagacagaaaaggaactgcaagaggttgaacagttcatcaaaagagttcta 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tactataacaagacagaaaaggaactgcaagaggttgaacagttcatcaaaagagttcta 840
Query: 1065 agctataag 1073
|||||||||
Sbjct: 841 agctataag 849
>BF01049B2H12
Length = 788
Score = 168 bits (85), Expect = 2e-41
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1139 agcatcgtacgtgtccgtgttgactatagtagcgttcacactcgaacgttacctggccat 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 agcatcgtacgtgtccgtgttgactatagtagcgttcacactcgaacgttacctggccat 763
Query: 1199 atgtcatcccttacacatctacgct 1223
|||||||||||||||||||||||||
Sbjct: 764 atgtcatcccttacacatctacgct 788
>BF01019A1H08
Length = 504
Score = 85.7 bits (43), Expect = 3e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 1084 gtccatcgcattgcagggagaggagctgcaacagtgcctgggacttgcgacccag 1138
||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 411 gtccatcgcgttgcagggagaggagcttcaacagtgcctgggagttgcgacccag 465
>BF01049B1F01
Length = 840
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 1094 ttgcagggagaggagctgcaacagtgcctgggacttgcgacccag 1138
||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 589 ttgcagggagaggagcttcaacagtgcctgggacttgcgacccag 633
>BF14_335_C4
Length = 1491
Score = 73.8 bits (37), Expect = 1e-12
Identities = 50/53 (94%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 1086 ccatcgcattgcagggagaggagctgcaacagtgcctgggacttgcgacccag 1138
||||||| ||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 1315 ccatcgcgttgcagg-agaggagcttcaacagtgcctgggacttgcgacccag 1264
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 253,358
Number of extensions: 6058
Number of successful extensions: 6058
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 6057
Number of HSP's successfully gapped: 5
Length of query: 2045
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2028
Effective length of database: 8,119,229
Effective search space: 16465796412
Effective search space used: 16465796412
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)