BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15143 (UTR included)
(1753 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 226 9e-59
BF01049A2D11 182 1e-45
>BF14_729_C3
Length = 2041
Score = 226 bits (114), Expect = 9e-59
Identities = 221/258 (85%), Gaps = 10/258 (3%)
Strand = Plus / Plus
Query: 1126 gagaagatggctggaatctatccaacacctgggaacccgttcttaaaaatataaaatccc 1185
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 1393 gagaagatggctggaatctatcaaacacctgggaccccgttcttaaaaatataaaatccc 1452
Query: 1186 atgtccgtaaccacaccgcaggacctcaagacaccgtgagcgcattctgccggcatgcag 1245
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1453 atgtccgaaaccacaccgcaggacctcaagacaccgtgagcgcattctgccggcatccag 1512
Query: 1246 agtcgtaggccagaaagttaagaaatcg---------gtcgataaataa-taggaccgac 1295
|| ||| |||| ||||||||||| | ||||||||| |||||| ||
Sbjct: 1513 agcggtacgccannnnattaagaaatcgatggcggtagatgataaataacaaggaccaac 1572
Query: 1296 taacagacattcaaatcttgtctgaccgttatcacagttgcttaaaactaaccgaaacgt 1355
| ||||||||||| | || ||||| |||| ||||| |||||| ||| ||||||||||||
Sbjct: 1573 tgacagacattcacacctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgt 1632
Query: 1356 cgggattatgtaattttt 1373
|||||||||||| |||||
Sbjct: 1633 cgggattatgtagttttt 1650
Score = 208 bits (105), Expect = 2e-53
Identities = 148/161 (91%), Gaps = 1/161 (0%)
Strand = Plus / Plus
Query: 965 acattggacacacaaagaggag-atcggtacaagggtgaaagaacacatctcagacatca 1023
|||||||||| || |||||||| ||||||||||| || || |||||||||||||||||||
Sbjct: 1171 acattggacagacgaagaggagcatcggtacaagagttaaggaacacatctcagacatca 1230
Query: 1024 aaaataggcgcgcctggaagtcagcagtgtgtgaacacacaatggacaaaccaggccact 1083
|||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1231 aaaacaggcgcgcgtcgaagtcagcagtgtgtgaacacacaatggacaaaccaggccact 1290
Query: 1084 acattcggtttgataaaccacaaatccttgctcgtgaagac 1124
||||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 1291 acattcgttttgataaacctcaaatcctcgctcgggaagac 1331
>BF01049A2D11
Length = 776
Score = 182 bits (92), Expect = 1e-45
Identities = 142/156 (91%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 965 acattggacacacaaagaggag-atcggtacaagggtgaaagaacacatctcagacatca 1023
|||||||||| ||||||||||| |||| ||||||||| ||||||||||||||||| ||||
Sbjct: 621 acattggacagacaaagaggagcatcgatacaagggttaaagaacacatctcagaaatca 680
Query: 1024 a-aaataggcgcgcctggaagtcagcagtgtgtgaacacacaatggacaaaccaggccac 1082
||||||| | | | |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 681 tgaaataggtgtacatcgaagtcagcagtatgtgaacacacaatggacaaaccaggccac 740
Query: 1083 tacattcggtttgataaaccacaaatccttgctcgt 1118
||||||||||||||||||||||||||||| ||||||
Sbjct: 741 tacattcggtttgataaaccacaaatcctcgctcgt 776
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 226,786
Number of extensions: 4988
Number of successful extensions: 4988
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4986
Number of HSP's successfully gapped: 4
Length of query: 1753
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1736
Effective length of database: 8,119,229
Effective search space: 14094981544
Effective search space used: 14094981544
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)