BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15149 (UTR included)
(1291 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041B2D03 595 e-170
BF01012B1C01 92 3e-18
BF01045B1C07 78 4e-14
BF01025A1A12 74 6e-13
BF14_729_C3 74 6e-13
BF01058A1C03 72 2e-12
BF14_729_C2 70 1e-11
>BF01041B2D03
Length = 743
Score = 595 bits (300), Expect = e-170
Identities = 306/308 (99%)
Strand = Plus / Plus
Query: 480 agcttgctggcgatcgacagcatggacgatatagagttgaagagcatccaactacaattc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 agcttgctggcgatcgacagcatggacgatatagagttgaagagcatccaactacaattc 212
Query: 540 ccgcgacggttcagtgacggagcctgtcaggaggtgcgagtgcacaccgaccgtggggat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 ccgcgacggttcagtgacggagcctgtcaggaggtgcgagtgcacaccgaccgtggggat 272
Query: 600 atcatggtggcggtgcgcggggaacgcaccaagcccgctatactgacttaccacgacatg 659
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 atcatggtggctgtgcgcggggaacgcaccaagcccgctatactgacttaccacgacatg 332
Query: 660 gggctcaattataccagcttccaaccattcttcaactacgtggacatgagagcgttgttg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gggctcaattataccagcttccaaccattcttcaactacgtggacatgagagcgttgttg 392
Query: 720 gagaatttctgcgttctgcacgtaaatgccccaggccaggaagagggggcgcccacgctg 779
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 393 gagaatttctgcgttctgcacgtaaatgcgccaggccaggaagagggggcgcccacgctg 452
Query: 780 cctgacga 787
||||||||
Sbjct: 453 cctgacga 460
>BF01012B1C01
Length = 950
Score = 91.7 bits (46), Expect = 3e-18
Identities = 87/100 (87%), Gaps = 3/100 (3%)
Strand = Plus / Plus
Query: 950 cgtgatcagggttgctgcaatgtaatcgaaacgtcgggagtgtgtagcttttaaaaataa 1009
|||||||| || |||||||| |||| ||||||||||||||||||||| || ||| |||
Sbjct: 664 cgtgatcacggctgctgcaaagtaaccgaaacgtcgggagtgtgtag---ttgaaactaa 720
Query: 1010 taaaatgacacgtagtaatccgaaaatattagtttcattt 1049
|||||| || |||||||||| ||||||||||||||||||
Sbjct: 721 taaaataactcgtagtaatcgtaaaatattagtttcattt 760
>BF01045B1C07
Length = 805
Score = 77.8 bits (39), Expect = 4e-14
Identities = 73/82 (89%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 951 gtgatcagggttgctgcaatgtaatcgaaacgtcgggagtgtgtagcttttaaaaataat 1010
||||||| || ||||||||| ||||||||||||||||||| ||||| ||||||||||||
Sbjct: 695 gtgatcacggatgctgcaatataatcgaaacgtcgggagtatgtag--tttaaaaataat 752
Query: 1011 aaaatgacacgtagtaatccga 1032
||||| || |||||| ||||||
Sbjct: 753 aaaat-acgcgtagtgatccga 773
>BF01025A1A12
Length = 880
Score = 73.8 bits (37), Expect = 6e-13
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 977 gaaacgtcgggagtgtgtagcttttaaaaataataaaatgacacgtagtaatccgaaaat 1036
|||||||||||||| ||||| ||||||| |||||||||| || || || ||||||||||
Sbjct: 158 gaaacgtcgggagtatgtagtttttaaacataataaaat-acgcgaagctatccgaaaat 100
Query: 1037 attagtttcattt 1049
|||||||||||||
Sbjct: 99 attagtttcattt 87
>BF14_729_C3
Length = 2041
Score = 73.8 bits (37), Expect = 6e-13
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 928 agacattctcatctcgtatgctcgtgatcagggttgctgcaatgtaatcgaaacgtcggg 987
|||||||| || ||||| ||| |||||||| ||||||||||| |||| ||||||||||||
Sbjct: 1577 agacattcacacctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcggg 1636
Query: 988 agtgtgtagcttttaaa 1004
| | ||||| |||||||
Sbjct: 1637 attatgtagtttttaaa 1653
>BF01058A1C03
Length = 779
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 998 ttttaaaaataataaaatgacacgtagtaatccgaaaatattagtttcattt 1049
|||||||||||||||||| ||| | ||||||||||||||||||||||||||
Sbjct: 455 ttttaaaaataataaaatagcactttgtaatccgaaaatattagtttcattt 506
>BF14_729_C2
Length = 1289
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 939 tctcgtatgctcgtgatcagggttgctgcaatgtaatcgaaacgtcgggagtgtgtagct 998
|||||| ||| |||||||| |||||||| || |||| ||||||||||||||| ||||| |
Sbjct: 528 tctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcgggagtatgtagtt 587
Query: 999 tttaaaaataataaa 1013
||||| || ||||||
Sbjct: 588 tttaacaaaaataaa 602
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 215,759
Number of extensions: 6209
Number of successful extensions: 6209
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 6206
Number of HSP's successfully gapped: 7
Length of query: 1291
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1274
Effective length of database: 8,119,229
Effective search space: 10343897746
Effective search space used: 10343897746
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)