BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15150 (UTR included)
(1894 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2498_C1 1215 0.0
BF01041B2D03 537 e-152
BF01031B1D09 96 2e-19
>BF14_2498_C1
Length = 893
Score = 1215 bits (613), Expect = 0.0
Identities = 619/621 (99%)
Strand = Plus / Plus
Query: 652 gttatgtatatccaactatggacgagctcgccaaccagatcaactacgtgctcgtgcact 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 gttatgtatatccaactatggacgagctcgccaaccagatcaactacgtgctcgtgcact 154
Query: 712 ttggcattaagagcttcataggcttcggcgtgggagtcggtgccaacatcttggcgcgtt 771
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 155 ttggcattaagagcttcataggcttcggcgtgggagtcggtgccaacatcttggcgcgat 214
Query: 772 tcgctcttaccaaccctgataaggtggatgctctaactctaatcaactgttcgtcgagcc 831
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 215 tcgctcttaccaaccctgataaggtggatgctctaactctaatcaactgctcgtcgagcc 274
Query: 832 aggcaggctggattgaatgggcgtctcacaagatgaattgtcgcgcgcttcgcagccgcg 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aggcaggctggattgaatgggcgtctcacaagatgaattgtcgcgcgcttcgcagccgcg 334
Query: 892 gtatgacacccgccgtggtcgattacctcatgtggtaccacttcggaaggtgtcctgagg 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gtatgacacccgccgtggtcgattacctcatgtggtaccacttcggaaggtgtcctgagg 394
Query: 952 agcgcaatgctgatctctcagcgatgtaccgttcctacttccgtcgtcatgtgaacgccg 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 agcgcaatgctgatctctcagcgatgtaccgttcctacttccgtcgtcatgtgaacgccg 454
Query: 1012 ggaacctcgccatgttggtggacagcttcgctcgtcgcaccgacctgaacatcacccgcc 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ggaacctcgccatgttggtggacagcttcgctcgtcgcaccgacctgaacatcacccgcc 514
Query: 1072 acgccggcaccctccgcccgccagtccttaacctggccggagcactctccccgcacctcg 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 acgccggcaccctccgcccgccagtccttaacctggccggagcactctccccgcacctcg 574
Query: 1132 agcaaacggtcacactcaacagccgtctacacccatccaactccacctggatgaagatct 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 agcaaacggtcacactcaacagccgtctacacccatccaactccacctggatgaagatct 634
Query: 1192 ctgattcggccatggtgctagaggagcagcccggaaaaatctctgaagcattccgtctat 1251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 ctgattcggccatggtgctagaggagcagcccggaaaaatctctgaagcattccgtctat 694
Query: 1252 ttttgcaaggggaaggatatg 1272
|||||||||||||||||||||
Sbjct: 695 ttttgcaaggggaaggatatg 715
Score = 147 bits (74), Expect = 8e-35
Identities = 85/88 (96%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1273 tggcgccgttgtctccaaccaagatcgtgttgttccgccggctgtctgacgctcgcgtgt 1332
||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 807 tggcgccgttgtctcca-ccaagatcgtgttgttccgccggctgtctgnngctcgcgtgt 865
Query: 1333 gccgtcactcgtccgtcatccgcatcac 1360
||||||||||||||||||||||||||||
Sbjct: 866 gccgtcactcgtccgtcatccgcatcac 893
>BF01041B2D03
Length = 743
Score = 537 bits (271), Expect = e-152
Identities = 280/283 (98%)
Strand = Plus / Plus
Query: 653 ttatgtatatccaactatggacgagctcgccaaccagatcaactacgtgctcgtgcactt 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ttatgtatatccaactatggacgagctcgccaaccagatcaactacgtgctcgtgcactt 520
Query: 713 tggcattaagagcttcataggcttcggcgtgggagtcggtgccaacatcttggcgcgttt 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 521 tggcattaagagcttcataggcttcggcgtgggagtcggtgccaacatcttggcgcgatt 580
Query: 773 cgctcttaccaaccctgataaggtggatgctctaactctaatcaactgttcgtcgagcca 832
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 tgctcttaccaaccctgataaggtggatgctctaactctaatcaactgttcgtcgagcca 640
Query: 833 ggcaggctggattgaatgggcgtctcacaagatgaattgtcgcgcgcttcgcagccgcgg 892
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 641 ggcaggctggattgaatgggcgtctcacaagatgaattgtcgcgctcttcgcagccgcgg 700
Query: 893 tatgacacccgccgtggtcgattacctcatgtggtaccacttc 935
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 tatgacacccgccgtggtcgattacctcatgtggtaccacttc 743
>BF01031B1D09
Length = 754
Score = 95.6 bits (48), Expect = 2e-19
Identities = 118/140 (84%), Gaps = 1/140 (0%)
Strand = Plus / Minus
Query: 510 ggggcaaccgagcagtcggcctgcgtgatggaggtagtaccatcgcctgtggacatccgc 569
||||||||||||||| ||||| | | |||||||||||||| || || |||||||||||
Sbjct: 754 ggggcaaccgagcagacggccacctt-atggaggtagtaccgtcacccatggacatccgc 696
Query: 570 aacatagatttgcggatgtgttgccaccctcgattagggaaaaggacgaggaaaaagtgg 629
||||| ||||||| |||||||| || ||| |||| ||||| ||| ||||||| ||||
Sbjct: 695 aacatcgatttgcagatgtgtttcccgccttgattggggaagaggggaaggaaaaggtgg 636
Query: 630 gaaacggagggaaaagggaa 649
|||| |||||||||||||||
Sbjct: 635 gaaagggagggaaaagggaa 616
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 209,326
Number of extensions: 4409
Number of successful extensions: 4409
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4407
Number of HSP's successfully gapped: 4
Length of query: 1894
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1877
Effective length of database: 8,119,229
Effective search space: 15239792833
Effective search space used: 15239792833
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)