BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15156 (UTR included)
(2551 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01052A1F11 922 0.0
BF14_1317_C1 642 0.0
>BF01052A1F11
Length = 807
Score = 922 bits (465), Expect = 0.0
Identities = 528/547 (96%), Gaps = 4/547 (0%)
Strand = Plus / Plus
Query: 2009 ccctctgtctactgagccctgcactgataatccagaactttaaatatacagacatatatt 2068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 ccctctgtctactgagccctgcactgataatccagaactttaaatatacagacatatatt 71
Query: 2069 atgtgtctttagtatatgcttagtgtttattgatgttaacttcaagtatcatattaatta 2128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atgtgtctttagtatatgcttagtgtttattgatgttaacttcaagtatcatattaatta 131
Query: 2129 attccatatattagtatgtcaattttatatgacgttatatatcagccgttagggtattag 2188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 attccatatattagtatgtcaattttatatgacgttatatatcagccgttagggtattag 191
Query: 2189 tagtatgatgtaacgaatgacgtactaggaacatatttaaaaactatattgataatgtcg 2248
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 192 tagtatgatgtaacgaatgacgtactaggaacatatttaaaaactatattgaaaatgtcg 251
Query: 2249 ctataatctttgtcgttaactttcaaatactgtctgtttatgtacgtgtagggttaatta 2308
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 252 ctataatctttgtcgttaactttcaaatactgtctgtttatatacgtgtagggttaatta 311
Query: 2309 acatatttgatgtaccatttaagttcgttctatataggtat--ataataaaaatttccgg 2366
|||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||
Sbjct: 312 acatatttgatgtaccatttaagttcgttctatataagtattgaaaataaaaatttccgg 371
Query: 2367 aaaacaaaatatcggtggcgagctggggtttattataaagttttaagcatccccatcgat 2426
|||||||||| ||||||| ||||||||||||||||||||||||||| || ||||||||||
Sbjct: 372 aaaacaaaatgtcggtggagagctggggtttattataaagttttaaacacccccatcgat 431
Query: 2427 cctatttgtgtcaaaaaaagttttaggcggtcaaaaggtcaaattttg--tttttttttt 2484
|||| |||||||||||||| ||| ||||||||||||||| ||||||| ||||||||||
Sbjct: 432 cctacctgtgtcaaaaaaagatttgggcggtcaaaaggtctaattttgtttttttttttt 491
Query: 2485 gcatttttctcaagaacagtaatgagtcttatcacgaaaaaaaatcaatccaaagttgta 2544
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gcacttttctcaataacagtaatgagtcttatcacgaaaaaaaatcaatccaaagttgta 551
Query: 2545 gttgtta 2551
|||||||
Sbjct: 552 gttgtta 558
>BF14_1317_C1
Length = 1337
Score = 642 bits (324), Expect = 0.0
Identities = 352/361 (97%), Gaps = 4/361 (1%)
Strand = Plus / Plus
Query: 2195 gatgtaacgaatgacgtactaggaacatatttaaaaactatattgataatgtcgctataa 2254
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 gatgtaacgaatgacgtactaggaacatatttaaaaactatattgaaaatgtcgctataa 60
Query: 2255 tctttgtcgttaactttcaaatactgtctgtttatgtacgtgtagggttaattaacatat 2314
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 61 tctttgtcgttaactttcaaatactgtctgtttatatacgtgtagggttaattaacatat 120
Query: 2315 ttgatgtaccatttaagttcgttctatataggtatataataaaaatttccggaaaacaaa 2374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgatgtaccatttaagttcgttctatataggtatataataaaaatttccggaaaacaaa 180
Query: 2375 atatcggtggcgagctggggtttattataaagttttaagcatccccatcgatcctatttg 2434
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 atatcggtggcgagctggggtttattataaagttttaagcatccccatcgaacctatttg 240
Query: 2435 tgtcaaaaaaagttttaggcggtcaaaaggtcaaattttg----ttttttttttgcattt 2490
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 241 tgtcaaaaaaagttttaggcggtcaaaaggtcaaattttgttttttttttttttgcattt 300
Query: 2491 ttctcaagaacagtaatgagtcttatcacgaaaaaaaatcaatccaaagttgtagttgtt 2550
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcacaagaacagtaatgagtcttgtcacgaaaaaaaatcaatccaaagttgtagttgtt 360
Query: 2551 a 2551
|
Sbjct: 361 a 361
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 288,261
Number of extensions: 5316
Number of successful extensions: 5316
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5313
Number of HSP's successfully gapped: 2
Length of query: 2551
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2534
Effective length of database: 8,119,229
Effective search space: 20574126286
Effective search space used: 20574126286
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)