BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15162 (UTR included)
(2371 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01058B1F02 1602 0.0
BF01050A1F05 1338 0.0
>BF01058B1F02
Length = 812
Score = 1602 bits (808), Expect = 0.0
Identities = 811/812 (99%)
Strand = Plus / Plus
Query: 306 cgagaatcgaaagcgtgaaggtgtcggtagagtcgtccggcatgccaacagtggctccga 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgagaatcgaaagcgtgaaggtgtcggtagagtcgtccggcatgccaacagtggctccga 60
Query: 366 cacactgacgcgatggcagcgcgaggcgcagccgccgcgcatacgaactgtgataaacaa 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cacactgacgcgatggcagcgcgaggcgcagccgccgcgcatacgaactgtgataaacaa 120
Query: 426 acttaatatatatacatatacaagttaaccgtccgtgaaagactttgagagagagtgtag 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acttaatatatatacatatacaagttaaccgtccgtgaaagactttgagagagagtgtag 180
Query: 486 tgtgaagccgcccttatgatcctcccaatggcagcgtacgcacaatttggctattcgtat 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtgaagccgcccttatgatcctcccaatggcagcgtacgcacaatttggctattcgtat 240
Query: 546 ccatccgcctcgcagttgctggttggcagtagcggggctggtaacggcggagcggcaacc 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccatccgcctcgcagttgctggttggcagtagcggggctggtaacggcggagcggcaacc 300
Query: 606 tcgccggacggcggttcgagctcagctccgccgctatctcccgggggctccgcggtggcg 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcgccggacggcggttcgagctcagctccgccgctatctcccgggggctccgcggtggcg 360
Query: 666 ggaggtgccctgtcccccggggctggcagccacgccagcacaccagccgcctcctgctgc 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaggtgccctgtcccccggggctggcagccacgccagcacaccagccgcctcctgctgc 420
Query: 726 gacacgccgcggcctatcatcaccgaccccgtctccgggcagaccgtctgctcatgccag 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gacacgccgcggcctatcatcaccgaccccgtctccgggcagaccgtctgctcatgccag 480
Query: 786 tacgacgcgagactggcactcacctcttatcctcgcctctccagtgctgccgttggagtc 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tacgacgcgagactggcactcacctcttatcctcgcctctccagtgctgccgttggagtc 540
Query: 846 tacggagctccatatccatccactgaccagaacccctatccaagcatcggcgttgatagc 905
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 541 tacggagctccatatccatccactgaccagaacccctatccaagcatcggcgtcgatagc 600
Query: 906 tccgcattctattcccctttgagtaatccctacgcgttgaaagagggcggtggtgaaatg 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tccgcattctattcccctttgagtaatccctacgcgttgaaagagggcggtggtgaaatg 660
Query: 966 tcggcttggacttcggcaggtcttcagccatcaggcggctattacccatacgaccccacg 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tcggcttggacttcggcaggtcttcagccatcaggcggctattacccatacgaccccacg 720
Query: 1026 ctcgctgcttacggatatggagctggatacgatttagctgccaggcgaaaaaacgctacc 1085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ctcgctgcttacggatatggagctggatacgatttagctgccaggcgaaaaaacgctacc 780
Query: 1086 agagaatcaacagctacgctcaaagcatggct 1117
||||||||||||||||||||||||||||||||
Sbjct: 781 agagaatcaacagctacgctcaaagcatggct 812
>BF01050A1F05
Length = 756
Score = 1338 bits (675), Expect = 0.0
Identities = 678/679 (99%)
Strand = Plus / Plus
Query: 1687 tggcggcggctccggttactgttttccgagacaccagcaatcaccacagcgcgaccctta 1746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tggcggcggctccggttactgttttccgagacaccagcaatcaccacagcgcgaccctta 70
Query: 1747 tcacaacccccaccactctaataaccaccaacctaaccaccaccacaacgagggatcggc 1806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tcacaacccccaccactctaataaccaccaacctaaccaccaccacaacgagggatcggc 130
Query: 1807 cgccttcaaacctttctataaaaggtaaagcaagtgaaagctgggtcgctgcactgccct 1866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 cgccttcaaacctttctataaaaggtaaagcaagtgaaagctgggtcgctgcactgccct 190
Query: 1867 actagtgactctgacgttcacagtggcacagtgtttccagggttcgtccagcttcatgtc 1926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 actagtgactctgacgttcacagtggcacagtgtttccagggttcgtccagcttcatgtc 250
Query: 1927 gagacgcagccgctgtttataacttatatagaatatgtaaattaatttcataatgtttgg 1986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gagacgcagccgctgtttataacttatatagaatatgtaaattaatttcataatgtttgg 310
Query: 1987 ttatcgtgtagattaaagaaattcctaaatttaaagcacagattattgtaatgtataaag 2046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ttatcgtgtagattaaagaaattcctaaatttaaagcacagattattgtaatgtataaag 370
Query: 2047 taatttgttaatttgtacttaaggaatttagtttcaagtgatttagatatggacggttgt 2106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 taatttgttaatttgtacttaaggaatttagtttcaagtgatttagatatggacggttgt 430
Query: 2107 ccttagtacttaaatcattatatggaaaagcgttgctcagtatttttatagatataagga 2166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ccttagtacttaaatcattatatggaaaagcgttgctcagtatttttatagatataagga 490
Query: 2167 tataacgaaaactgattttccatactatttatgatagattcaagaagcgcaattatttat 2226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tataacgaaaactgattttccatactatttatgatagattcaagaagcgcaattatttat 550
Query: 2227 aataataataaaaaaattggttatagtcaaaatgtatagaacattaattattatttcaac 2286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aataataataaaaaaattggttatagtcaaaatgtatagaacattaattattatttcaac 610
Query: 2287 gaatatttcttttaaggattattcttttcagttcttccaaataaagtttataaaactatt 2346
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 611 gaatatttcttttaaggattattcttttcagttcttccaaataaagtttataaaaatatt 670
Query: 2347 atgtccataagtttttttt 2365
|||||||||||||||||||
Sbjct: 671 atgtccataagtttttttt 689
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 224,052
Number of extensions: 4717
Number of successful extensions: 4717
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4717
Number of HSP's successfully gapped: 2
Length of query: 2371
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2354
Effective length of database: 8,119,229
Effective search space: 19112665066
Effective search space used: 19112665066
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)