BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15183 (UTR included)
(3445 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01052B2H06 1552 0.0
>BF01052B2H06
Length = 806
Score = 1552 bits (783), Expect = 0.0
Identities = 792/795 (99%)
Strand = Plus / Plus
Query: 1905 atctgggaacgtttacgtgaagttggagtccccgacaaaataatcaacctgataaaagcc 1964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 atctgggaacgtttacgtgaagttggagtccccgacaaaataatcaacctgataaaagcc 71
Query: 1965 ctctacaggaaatattcctgtaaagtaattcacaacggtcttttgtcggaggacatacca 2024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 ctctacaggaaatattcctgtaaagtaattcacaacggtcttttgtcggaggacatacca 131
Query: 2025 gtcaatgcaggtgttcgccaggggtgtctcctttctcctattctcttccttgtcgttctg 2084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gtcaatgcaggtgttcgccaggggtgtctcctttctcctattctcttccttgtcgttctg 191
Query: 2085 gatggtatcatgcagaaagtgacgaaaagcaagcgccgcggcatagaatggggactgtcc 2144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gatggtatcatgcagaaagtgacgaaaagcaagcgccgcggcatagaatggggactgtcc 251
Query: 2145 agcactttggaagatttggactatgccgatgacctatgcctgctgagccatacacacgcc 2204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 agcactttggaagatttggactatgccgatgacctatgcctgctgagccatacacacgcc 311
Query: 2205 aacatgcaaaccaaactggacgacctacgacgagaagcattagagatggggctaaaaata 2264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aacatgcaaaccaaactggacgacctacgacgagaagcattagagatggggctaaaaata 371
Query: 2265 aacacgcgaaagacccaggagatgaggtgcggagcaacaacctctctgccgttgctcatt 2324
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 aacacgcgtaagacccaggagatgaggtgcggagcaacaacctctctgccgttgctcatt 431
Query: 2325 ggcacagaggctatagaaaaaatccacaaatacacctacctaggaagcatagtatcggag 2384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ggcacagaggctatagaaaaaatccacaaatacacctacctaggaagcatagtatcggag 491
Query: 2385 agtggaggtgccgaagaggacatcgcttcgagaatcgccaaatcaagagcagccttcgcg 2444
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 492 agtggaggtgccgaagaggacatcgcttcgagaatcgccaaatcaaaagcagccttcgcg 551
Query: 2445 caactccgtcctgtatggcagtcgcggaaactaaccaggagagttaaactcaaaatattc 2504
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 552 caactccgtcctgtatggcagtcgcggaaactaaccaggagggttaaactcaaaatattc 611
Query: 2505 cggtccaacgtcaaatccgtgctgttatacggatgtgagacgtggaaggttactaaggac 2564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 cggtccaacgtcaaatccgtgctgttatacggatgtgagacgtggaaggttactaaggac 671
Query: 2565 atctcgcatcggcttcaggtcttcgtcaattggtgtcttcgccgtattctcggtatttac 2624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 atctcgcatcggcttcaggtcttcgtcaattggtgtcttcgccgtattctcggtatttac 731
Query: 2625 tggcccgagaaaatttccaacgttaatctctgggaacgctgcggtgagacaccgattgac 2684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 tggcccgagaaaatttccaacgttaatctctgggaacgctgcggtgagacaccgattgac 791
Query: 2685 ctgcaaatcaaacgt 2699
|||||||||||||||
Sbjct: 792 ctgcaaatcaaacgt 806
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 304,354
Number of extensions: 5731
Number of successful extensions: 5731
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5731
Number of HSP's successfully gapped: 1
Length of query: 3445
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3427
Effective length of database: 8,109,745
Effective search space: 27792096115
Effective search space used: 27792096115
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)