BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15184 (UTR included)
(1225 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 123 7e-28
BF01055B2A04 96 2e-19
BF01023A2A12 92 2e-18
BF01031B2E06 88 4e-17
BF01037B1H08 72 2e-12
>BF14_335_C2
Length = 1827
Score = 123 bits (62), Expect = 7e-28
Identities = 104/118 (88%)
Strand = Plus / Minus
Query: 345 atatttctgtattatcgaattttaaagcgcgttgtgtgaacagagcttacagttccttgg 404
||||||||||||| |||||||||||||||| | | || ||||| ||| |||||||||
Sbjct: 1275 atatttctgtattcgcgaattttaaagcgcgctacgctaatagagcctacggttccttgg 1216
Query: 405 gaaaccaacatccccaaagaccatgccatcaaggtcaacaagtattacgagctcacta 462
| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 1215 aagaccaacatccccaaaaaccatgccatcaaggtcaacaagtattatgagctcacta 1158
>BF01055B2A04
Length = 830
Score = 95.6 bits (48), Expect = 2e-19
Identities = 107/126 (84%), Gaps = 3/126 (2%)
Strand = Plus / Minus
Query: 362 aattttaaagcgcgttgtgtgaacagagcttacagttccttgggaaaccaacatccccaa 421
|||||| |||| |||||| | || ||||||||| |||| ||| ||||||||||||||||
Sbjct: 563 aatttttaagctcgttgttttaatagagcttacgattccctggaaaaccaacatccccaa 504
Query: 422 agaccatgccatcaaggtcaacaagtattacgagctcactaactaactcactagaaatag 481
||||| ||||| | ||||||| ||| ||| ||||||||||| |||||||||| |||||
Sbjct: 503 agaccgtgccaccgaggtcaataag---tacaagctcactaacgaactcactaggaatag 447
Query: 482 attcgt 487
||||||
Sbjct: 446 attcgt 441
>BF01023A2A12
Length = 723
Score = 91.7 bits (46), Expect = 2e-18
Identities = 46/46 (100%)
Strand = Plus / Minus
Query: 682 gctcactgctgagcaaaggcctcttatcacatggagaaggttagag 727
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gctcactgctgagcaaaggcctcttatcacatggagaaggttagag 277
>BF01031B2E06
Length = 707
Score = 87.7 bits (44), Expect = 4e-17
Identities = 57/60 (95%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 405 gaaaccaacatccccaaagaccatgccatcaaggtcaacaagtattacg-agctcactaa 463
||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||
Sbjct: 436 gaaaccaacatccccaaagaccatgccatcaagatcaataagtattacgaagctcactaa 495
>BF01037B1H08
Length = 758
Score = 71.9 bits (36), Expect = 2e-12
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 729 acttgccaggtttcgaacccgtgtcctcacgtatgagaggcggaccttttaacttccagg 788
||||||||||||||||||||| | | ||||||||||||||||| || |||||| ||||||
Sbjct: 139 acttgccaggtttcgaacccgcgccttcacgtatgagaggcgggcc-tttaacctccagg 81
Query: 789 ccac 792
||||
Sbjct: 80 ccac 77
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 182,098
Number of extensions: 3695
Number of successful extensions: 3695
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 3693
Number of HSP's successfully gapped: 5
Length of query: 1225
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1208
Effective length of database: 8,119,229
Effective search space: 9808028632
Effective search space used: 9808028632
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)