BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15191 (UTR included)
(2293 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022A2A07 1277 0.0
BF14_729_C3 1094 0.0
BF01042B1B10 151 6e-36
>BF01022A2A07
Length = 644
Score = 1277 bits (644), Expect = 0.0
Identities = 644/644 (100%)
Strand = Plus / Plus
Query: 557 tataaaggcacctacgcctttttattcgttagtcccgaatgttggtttggaagatgaatc 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tataaaggcacctacgcctttttattcgttagtcccgaatgttggtttggaagatgaatc 60
Query: 617 gccttcctccaagagtgaggcctctcaagaagaagaaaatgcggacactgaaacagcaaa 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gccttcctccaagagtgaggcctctcaagaagaagaaaatgcggacactgaaacagcaaa 120
Query: 677 tacacaaacagatgtatctcctattaatcaaacggatataacagacgcacaacgtagccc 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tacacaaacagatgtatctcctattaatcaaacggatataacagacgcacaacgtagccc 180
Query: 737 acaccatcagttcgcgaatggggaacgaaggagaagaaaattgcctgaaatacccaaaac 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acaccatcagttcgcgaatggggaacgaaggagaagaaaattgcctgaaatacccaaaac 240
Query: 797 cagaaaatccttaatgtcttcaagtcaaccgtcttcattagctgatgaattaggagcctt 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagaaaatccttaatgtcttcaagtcaaccgtcttcattagctgatgaattaggagcctt 300
Query: 857 aactggagtcattatacgaccagggtgtcaagggcggcccctattagttcttaaatgtgg 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aactggagtcattatacgaccagggtgtcaagggcggcccctattagttcttaaatgtgg 360
Query: 917 ataccttcttgatgaagactccagtccagactccgaaagattacaaagtcttggggatgt 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ataccttcttgatgaagactccagtccagactccgaaagattacaaagtcttggggatgt 420
Query: 977 cgacagcggacacagtaccgcccattcaccgatcgatactggccccaagagtctttctcc 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgacagcggacacagtaccgcccattcaccgatcgatactggccccaagagtctttctcc 480
Query: 1037 tactccgctacaacaaaatgtatcaccgacgtctagttgtagtatcagcggaattaactt 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tactccgctacaacaaaatgtatcaccgacgtctagttgtagtatcagcggaattaactt 540
Query: 1097 ttctggtaacgtgacaaccgttcctcacagccaactggaaatgttagaagcgacgcacag 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttctggtaacgtgacaaccgttcctcacagccaactggaaatgttagaagcgacgcacag 600
Query: 1157 aggtttacacaaatttaatcctaggcatcatgatgaaattgaag 1200
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aggtttacacaaatttaatcctaggcatcatgatgaaattgaag 644
>BF14_729_C3
Length = 2041
Score = 1094 bits (552), Expect = 0.0
Identities = 564/568 (99%)
Strand = Plus / Plus
Query: 1557 tgcattgattacttttattcccttaagaacgtatctttttgtgcgttccatcctcgtgat 1616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcattgattacttttattcccttaagaacgtatctttttgtgcgttccatcctcgtgat 60
Query: 1617 caccgatatttaggtttcatcacaaagcatccaacgttacaaagatttgcttgccacgtg 1676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caccgatatttaggtttcatcacaaagcatccaacgttacaaagatttgcttgccacgtg 120
Query: 1677 tttagaggaacagaatctactagaccagttgcagaagctgtggggcgggcattccagcgt 1736
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 121 tttagaggaacagaatctactagaccagttgcagaagctgtgggacgggcattccagcgt 180
Query: 1737 ttttatcagaaattcatagaaactgcatatccaatcgaagacatctatatagagtaaaac 1796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttttatcagaaattcatagaaactgcatatccaatcgaagacatctatatagagtaaaac 240
Query: 1797 tctaattaattgatagtaatgtatttaaatgtgattttcacagactcttagcgcaacatt 1856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tctaattaattgatagtaatgtatttaaatgtgattttcacagactcttagcgcaacatt 300
Query: 1857 taagcctttaaattattccaaataattaattaatcagacacacaatcacagttactattt 1916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taagcctttaaattattccaaataattaattaatcagacacacaatcacagttactattt 360
Query: 1917 ttcatattaaatgattataatagcaagttcttgatagaaatgtagctctagaaatgattt 1976
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtcatattaaataattataatagcaagttcttgatagaaatgtagctctagaaatgattt 420
Query: 1977 caattactaatttaatcatattgtgaaggtgtcaactacataccgtttatatattaaagg 2036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caattactaatttaatcatattgtgaaggtgtcaactacataccgtttatatattaaagg 480
Query: 2037 tcttataggtttcccccgttgtcgctgacatattcatggaggacttcgaggtgcgagccc 2096
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 481 tcttataggtttcccccgttgtcgctgaaatattcatggaggacttcgaggtgcgagccc 540
Query: 2097 tttgctctcctcctataagacctttaat 2124
||||||||||||||||||||||||||||
Sbjct: 541 tttgctctcctcctataagacctttaat 568
Score = 71.9 bits (36), Expect = 4e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 1994 atattgtgaaggtgtcaactacataccgtttatatattaaaggtcttatagg 2045
||||||| ||||||||| |||||||||||||| | |||||||||||||||||
Sbjct: 603 atattgtaaaggtgtcatctacataccgtttaaaaattaaaggtcttatagg 552
>BF01042B1B10
Length = 802
Score = 151 bits (76), Expect = 6e-36
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 2214 attcagatttgaaatgtataaataagaatttgtgtataaaatcacattcgcaaaaacaaa 2273
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 attcagatttgaaatgtataaataataatttgtgtataaaatcacattcgcaaaaacaaa 60
Query: 2274 agattcgctaagtggctgtg 2293
||||||||||||||||||||
Sbjct: 61 agattcgctaagtggctgtg 80
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 267,997
Number of extensions: 5175
Number of successful extensions: 5175
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5175
Number of HSP's successfully gapped: 4
Length of query: 2293
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2276
Effective length of database: 8,119,229
Effective search space: 18479365204
Effective search space used: 18479365204
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)