BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15200 (UTR included)
(3154 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01049A1D10 408 e-113
>BF01049A1D10
Length = 798
Score = 408 bits (206), Expect = e-113
Identities = 206/206 (100%)
Strand = Plus / Minus
Query: 1293 gcctcctgtgatctagatccatcaacaccatggaaattaatggaaatttgtgaaggttgg 1352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gcctcctgtgatctagatccatcaacaccatggaaattaatggaaatttgtgaaggttgg 630
Query: 1353 gaggcagatgtcacaagcgcctgccagccaacaaacagtcacttcccagatacacttgag 1412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gaggcagatgtcacaagcgcctgccagccaacaaacagtcacttcccagatacacttgag 570
Query: 1413 ttcaacggaactatactcctttcatccacaatcactgaacatcagtgcgtctatatacag 1472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ttcaacggaactatactcctttcatccacaatcactgaacatcagtgcgtctatatacag 510
Query: 1473 ctcaatcatatacagatgcctgatgg 1498
||||||||||||||||||||||||||
Sbjct: 509 ctcaatcatatacagatgcctgatgg 484
Score = 200 bits (101), Expect = 1e-50
Identities = 101/101 (100%)
Strand = Plus / Minus
Query: 1497 ggatcaatacattaccccaattgtatctacaagagtcaataccaggtcgaagcgaacctt 1556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 ggatcaatacattaccccaattgtatctacaagagtcaataccaggtcgaagcgaacctt 85
Query: 1557 ttccacgcctcctgtgagatagaatgtgacaacgaaatggt 1597
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 ttccacgcctcctgtgagatagaatgtgacaacgaaatggt 44
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 445,534
Number of extensions: 15394
Number of successful extensions: 15394
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 15394
Number of HSP's successfully gapped: 2
Length of query: 3154
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3136
Effective length of database: 8,109,745
Effective search space: 25432160320
Effective search space used: 25432160320
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)