BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15217 (UTR included)
(3292 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1293_C1 1768 0.0
>BF14_1293_C1
Length = 1103
Score = 1768 bits (892), Expect = 0.0
Identities = 1041/1092 (95%), Gaps = 15/1092 (1%)
Strand = Plus / Plus
Query: 2201 caaattgacctccatcaaatatttgggcggaaggaagttggaggatttcagctcctacat 2260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaattgacctccatcaaatatttgggcggaaggaagttggaggatttcagctcctacat 60
Query: 2261 gctcctcaagaacaacagcggcggcttcgacctgacacacgtcagggaatccgtcaaagt 2320
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 61 gctcctcaagaacaacagcggcggcttcgacctgacacacgtccgggaatccgtcaaagt 120
Query: 2321 ttacaagaaacctgaaaaaaaataccccgttaagccagtagactgtgagaacaaggagac 2380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttacaagaaacctgaaaaaaaataccccgttaagccagtagactgtgagaacaaggagac 180
Query: 2381 cggccacgaacagctagcgcgtgccgacagcgagcccacgccggccgaaaacgcggcgta 2440
|||||||||||||| |||||||||||||||| |||| |||||||||||||| | |||||
Sbjct: 181 cggccacgaacagccggcgcgtgccgacagcgggcccgcgccggccgaaaacacagcgta 240
Query: 2441 catcaaatttaatagaccgaaaccgatgaaatcgaacagcaggatagatgcgaaggacag 2500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catcaaatttaatagaccgaaaccgatgaaatcgaacagcaggatagatgcgaaggacag 300
Query: 2501 agaagtcttggagccgaggaaaagagcgaagacgactatatacaagacgttacccgtggt 2560
|||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 301 agaagtgttggagccgaggaaaagagcgaagacgactatatacaagacattgcccgtggt 360
Query: 2561 gaaggtggtctcctaccagagcagcgccaacaagggactggtgctgctcaaagataacct 2620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaaggtggtctcctaccagagcagcgccaacaagggactggtgctgctcaaagataacct 420
Query: 2621 ggtggagggcggcagaagcaatgtggtgctgaacaaacagttctcgctcccgataaagat 2680
| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 421 gctggagggcggcagaagcaatgtggtgctgaacaaacagttctcgctcccaataaagat 480
Query: 2681 actaccgaagtccaacaagcagatcaaaatcggtccagtcaaaagaaacacacaacagca 2740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 actaccgaagtccaacaagcagatcaaaatcggtccagtcaaaagaaacacacaacagca 540
Query: 2741 gaacagcgtcccgagcaagcgaagcaaaaacacaggcgggaagaaaacttagcgagggat 2800
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaacagcgtcccgagcaagcggagcaaaaacacaggcgggaagaaaacttagcgagggat 600
Query: 2801 ttcttgtttagtttcagcaaatattgattatgatcttacttacttatatacggccctggc 2860
|||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 601 ttcttgtttagttttagcaaatattgattatgatcttactaacttatatacggccctggc 660
Query: 2861 tggatgtggaaactagtatttgcgcctcttccttatgcaatataatattttttttttatt 2920
|||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 661 tggatgtggaaactagtatttgcgcctcttccttat---ata-----------ttttatt 706
Query: 2921 atctgtatcaataagaccttacttaaaaagtattgaaagtatattatctgtgcactgacc 2980
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 707 atctgtatcaataagacattacttaaaaagtattgaaagtatataatctgtgcactgacc 766
Query: 2981 caagttctctcgattcatgtattattatgggacatttaacctcatttttgaggtcaaggg 3040
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 767 caagttctctcaattcatgtattattatgtgacatttaacctcatttttgaggtcaaggg 826
Query: 3041 tcaccgaccattaacagcactctggagtccagctgcagctttgacattttttttttttat 3100
|||| |||||||||||||||||||||||||||| |||||||||| | |||||||||||||
Sbjct: 827 tcacggaccattaacagcactctggagtccagcagcagctttgata-tttttttttttat 885
Query: 3101 taatataaatagctttttacgaatagaattaaagtccttagacagtaagtagtgaatata 3160
|||||||||||| ||||||||||||||||||||||||||||| || || ||||||||||
Sbjct: 886 taatataaatagatttttacgaatagaattaaagtccttagatagaaaatagtgaatatt 945
Query: 3161 tcacgagaaaatagattaaataataacacttgtgcttgtgggtcaggacggggacggaaa 3220
||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 946 acacaagaaaatagattaaataataacactagtgcttgtgggtcaggacagggacggaaa 1005
Query: 3221 aaacgttttattgatacagataataaatacatcgcggacgaagtcgcgggcgaagattaa 3280
||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 1006 aaaggttttattgatacagataataaatacatcgcggacgaagtcgcgggcgannannaa 1065
Query: 3281 ctttgttttttt 3292
||||||||||||
Sbjct: 1066 ctttgttttttt 1077
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 407,653
Number of extensions: 21388
Number of successful extensions: 21388
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 21387
Number of HSP's successfully gapped: 2
Length of query: 3292
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3274
Effective length of database: 8,109,745
Effective search space: 26551305130
Effective search space used: 26551305130
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)