BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15228 (UTR included)
(2170 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01015A1G04 1257 0.0
>BF01015A1G04
Length = 662
Score = 1257 bits (634), Expect = 0.0
Identities = 655/662 (98%)
Strand = Plus / Plus
Query: 528 aaagtgtctgaattggaagctaaactcgcagcagtgaagggaaatgttggagcagtccga 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaagtgtctgaattggaagctaaactcgcagcagtgaagggaaatgttggagcagtccga 60
Query: 588 caaaaaatcgaagttatgtcttctgaagtagtagattccaatccctacagccgactcatg 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caaaaaatcgaagttatgtcttctgaagtagtagattccaatccctacagccgactcatg 120
Query: 648 gctttaaagcgtatgggtatagtgaacaactatgagaagatccgtgagatgtcagtagct 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctttaaagcgtatgggtatagtgaacaactatgagaagatccgtgagatgtcagtagct 180
Query: 708 gtagtcggtgtgggtggagtcggcagtgtcactgcggagatgttgacaagatgtggtatc 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtagtcggtgtgggtggagtcggcagtgtcactgcggagatgttgacaagatgtggtatc 240
Query: 768 ggaaagttaatcctcttcgattatgacaaagtggagttggccaacatgaaccgtctgttc 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaaagttaatcctcttcgattatgacaaagtggagttggccaacatgaaccgtctgttc 300
Query: 828 ttccaaccacatcaggccggcctgagtaaggtagatgcagcgtcagccacattaagagcc 887
|||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 301 ttccaaccacatcagggcggcctgagcaaggttgatgcagcgtcagccacattaagagcc 360
Query: 888 atcaacccagatgtcaccattgatgcatacaactacaatatcactacggtcgacaatttc 947
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atcaacccagacgtcaccattgatgcatacaactacaatatcactacggtcgacaatttc 420
Query: 948 caaaatttctgtgatactattagaacaggcagcttaactgaaggccccgtagacctggtg 1007
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 421 caaaatttctgtgatactattagaacaggcagcttaaccgaaggccccgtagacctggtg 480
Query: 1008 ctgagctgtgtcgataattttgaggctcgcatggccatcaacatggcctgcaatgaactc 1067
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctgagctgtgtcgacaatttcgaggctcgcatggccatcaacatggcctgcaatgaactc 540
Query: 1068 aatcagaagtggtttgagtctggtgttagtgagaatgctgtgtctggacatatacagttc 1127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aatcagaagtggtttgagtctggtgttagtgagaatgctgtgtctggacatatacagttc 600
Query: 1128 atcataccgggggagactgcttgctttgcatgcgcgccgccgctggtggtggcgtctaat 1187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atcataccgggggagactgcttgctttgcatgcgcgccgccgctggtggtggcgtctaat 660
Query: 1188 at 1189
||
Sbjct: 661 at 662
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 231,621
Number of extensions: 4804
Number of successful extensions: 4804
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4803
Number of HSP's successfully gapped: 1
Length of query: 2170
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2153
Effective length of database: 8,119,229
Effective search space: 17480700037
Effective search space used: 17480700037
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)