BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15236 (UTR included)
(2578 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_885_C1 2524 0.0
>BF14_885_C1
Length = 1308
Score = 2524 bits (1273), Expect = 0.0
Identities = 1282/1285 (99%)
Strand = Plus / Plus
Query: 406 ggaacagagataagatgtctcacggaaattcaacgcttttaagtaacattagccatttta 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24 ggaacagagataagatgtctcacggaaattcaacgcttttaagtaacattagccatttta 83
Query: 466 tttaaacctaatggcttctacgaaataactccaacatggtagcactcgatgagaaaagtg 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 tttaaacctaatggcttctacgaaataactccaacatggtagcactcgatgagaaaagtg 143
Query: 526 tgcatttagatgaggtgttgaaaaaatttggtgctattaatcgctatcacgttcaagcga 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 tgcatttagatgaggtgttgaaaaaatttggtgctattaatcgctatcacgttcaagcga 203
Query: 586 ttattctgatcagttttgcttttttcaacaatggcatgcattgtattaattacgttatag 645
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 204 ttattttgatcagttttgcttttttcaacaatggcatgcattgcattaattacgttatag 263
Query: 646 ttgcagaggaaacaccatacagatgcaaaatagaaccgtgtgaaatgcaaagcaatgttt 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttgcagaggaaacaccatacagatgcaaaatagaaccgtgtgaaatgcaaagcaatgttt 323
Query: 706 tcgagtcttcgtggtacaatttcagtgttccgccagactcacgaggatgtaagagatacc 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcgagtcttcgtggtacaatttcagtgttccgccagactcacgaggatgtaagagatacc 383
Query: 766 gattcgatctcaaagaatgtgatccattcagcttcaacacatcaattgtagaaacttgtg 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gattcgatctcaaagaatgtgatccattcagcttcaacacatcaattgtagaaacttgtg 443
Query: 826 atgaatgggtttacaagaaaaacgatagttttgtcgccgagtttcagttagcgtgtcaga 885
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 444 atgaatgggtttacaagaaaaacgatagctttgtcgccgagtttcagttagcgtgtcaga 503
Query: 886 attggaagagaacttttgttggaaccgttcatagtattggactcatgtgtggattatttt 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 attggaagagaacttttgttggaaccgttcatagtattggactcatgtgtggattatttt 563
Query: 946 ttcaaggacagctatccgataagattggacggaaagccgcaacagtaatatcaggtttag 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttcaaggacagctatccgataagattggacggaaagccgcaacagtaatatcaggtttag 623
Query: 1006 ctgccggagtgctaggcattgcaaagagtttttcaaatacctatacattatacgtaattt 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctgccggagtgctaggcattgcaaagagtttttcaaatacctatacattatacgtaattt 683
Query: 1066 tagagtggctcgaagccactataggagataactgttcacctgcttttattttagccgttg 1125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tagagtggctcgaagccactataggagataactgttcacctgcttttattttagccgttg 743
Query: 1126 aactggttcacagcgattacagattgcaccaacaaatatttttgtgcgtcattgctgcca 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aactggttcacagcgattacagattgcaccaacaaatatttttgtgcgtcattgctgcca 803
Query: 1186 tgggtggagtaacatttgccattgcagcatatctagtgccatactggagagactttgttc 1245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tgggtggagtaacatttgccattgcagcatatctagtgccatactggagagactttgttc 863
Query: 1246 gagttatttacgctccagctttcctgtacatcataatatatttcatcatggatgagagcg 1305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 gagttatttacgctccagctttcctgtacatcataatatatttcatcatggatgagagcg 923
Query: 1306 tgcgatggttattaagtaaaggaaagaggaaacaagcaacaaagttattattaaaaatgg 1365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 tgcgatggttattaagtaaaggaaagaggaaacaagcaacaaagttattattaaaaatgg 983
Query: 1366 cgaagataaataaaatctctctggatagaaaaatgcttcttaatatacagtgtgaagagg 1425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 cgaagataaataaaatctctctggatagaaaaatgcttcttaatatacagtgtgaagagg 1043
Query: 1426 ggacaaagaattctgccttgagggagacattccgatcaaggattgttgcgaaacgatttt 1485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 ggacaaagaattctgccttgagggagacattccgatcaaggattgttgcgaaacgatttt 1103
Query: 1486 taatatgtttattatggtggacttcttgtacgttcatctgttttggcttaatagtgaatg 1545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1104 taatatgtttattatggtggacttcttgtacgttcatctgttttggcttaatagtgaatg 1163
Query: 1546 tggggtcgctcgcagggaacaaatattttaattttgccatcatgtccttatctgatatcc 1605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164 tggggtcgctcgcagggaacaaatattttaattttgccatcatgtccttatctgatatcc 1223
Query: 1606 cagccagtattgcgatgttttatgtactaaaacgatttagaaggaagaagccacttcttg 1665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1224 cagccagtattgcgatgttttatgtactaaaacgatttagaaggaagaagccacttcttg 1283
Query: 1666 tttcatttataacagcaggactctt 1690
|||||||||||||||||||||||||
Sbjct: 1284 tttcatttataacagcaggactctt 1308
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 340,512
Number of extensions: 6551
Number of successful extensions: 6551
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6549
Number of HSP's successfully gapped: 1
Length of query: 2578
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2561
Effective length of database: 8,119,229
Effective search space: 20793345469
Effective search space used: 20793345469
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)