BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15262 (UTR included)
(4780 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023B1H06 595 e-169
>BF01023B1H06
Length = 712
Score = 595 bits (300), Expect = e-169
Identities = 336/344 (97%), Gaps = 8/344 (2%)
Strand = Plus / Plus
Query: 4444 tcacctatttggaaagaaaccacattttattgttaggtttattaacatagaagatttgaa 4503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcacctatttggaaagaaaccacattttattgttaggtttattaacatagaagatttgaa 60
Query: 4504 agaattaaatttcctgaatttcccgtctattaaaattaatctcataaataaaagtataga 4563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaattaaatttcctgaatttcccgtctattaaaattaatctcataaataaaagtataga 120
Query: 4564 ggcctaaagcataccaccaaatcttttctaggtataattctaattttactgcctttattc 4623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggcctaaagcataccaccaaatcttttctaggtataattctaattttactgcctttattc 180
Query: 4624 tgtgtgcaatgaaacggtagttgatgtgttaaaatacgattacattattcctttggaact 4683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtgtgcaatgaaacggtagttgatgtgttaaaatacgattacattattcctttggaact 240
Query: 4684 ttatgcatgtttaaataatgacactaaatttacaaaatgt--agttatctcctt--atgt 4739
|||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 241 ttatgcatgtttaaataatgacactaaatttacaaaatgtagagttatctcctttaatgt 300
Query: 4740 t---aatatatatatatatgt-aaaaaaatggaagtagtatgaa 4779
| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 301 taaaaatatatatatatatgtaaaaaaaatggaagtagtatgaa 344
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 496,757
Number of extensions: 15130
Number of successful extensions: 15130
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 15125
Number of HSP's successfully gapped: 1
Length of query: 4780
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4762
Effective length of database: 8,109,745
Effective search space: 38618605690
Effective search space used: 38618605690
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)