BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15267 (UTR included)
(840 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025B2G10 611 e-175
BF01037A2A03 363 e-100
>BF01025B2G10
Length = 739
Score = 611 bits (308), Expect = e-175
Identities = 392/418 (93%), Gaps = 14/418 (3%)
Strand = Plus / Minus
Query: 79 ttttcccataatgagatgtcttcagtgtaagaacgacgagctcagactaaccaagattga 138
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 644 ttttcccataataagatgtcttcactgtaagaacgacgagctcagactaaccaagattga 585
Query: 139 gaaatatttactccatggaaagtcaggtgttcacagtgttttagggaagttaaaatttcc 198
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gaaatatttactccatggaaactcaggtgttcacagtgttttagggaagttaaaatttcc 525
Query: 199 taaaactctatttacacaaaacaaagcccaaata-atgaataatattcagcaataataat 257
|||||||||||||||||||||||||||||||||| || | |||| |||||
Sbjct: 524 taaaactctatttacacaaaacaaagcccaaatacattattaatt----gcaat------ 475
Query: 258 attacaatgacttcagcgcgcggtccgcacgcggcgcccat-gatgtttctagacaaaag 316
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 474 --tacaatgacttcagcgcgcggtccgcacgcggcgcccattgatgtttctagacaaaag 417
Query: 317 acctttgtacgatgataacataaaaataaatagaaatgatggcttcgaaaagtagttaaa 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 acctttgtacgatgataacataaaaataaatagaaatgatggcttcgaaaagtagttaaa 357
Query: 377 gtccattgtatacgcaggtgttaacttaattgtttatcatactatgtatttataacacat 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gtccattgtatacgcaggtgttaacttaattgtttatcatactatgtatttataacacat 297
Query: 437 tttataaagaaagaagaattttacaagtggtctcaaacttttggccggcagtgtatat 494
|||||||||||| || | ||| || ||||||||||||||||||||||||||||||||
Sbjct: 296 tttataaagaaataatattttaacttgtggtctcaaacttttggccggcagtgtatat 239
>BF01037A2A03
Length = 797
Score = 363 bits (183), Expect = e-100
Identities = 211/219 (96%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 264 atgacttcagcgcgcggtccgcacgcggcgcccat-gatgtttctagacaaaagaccttt 322
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 20 atgacttcagcgcgcggtccgcacgcggcgcccattgatgtttctagacaaaagaccttt 79
Query: 323 gtacgatgataacataaaaataaatagaaatgatggcttcgaaaagtagttaaagtccat 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 gtacgatgataacataaaaataaatagaaatgatggcttcgaaaagtagttaaagtccat 139
Query: 383 tgtatacgcaggtgttaacttaattgtttatcatactatgtatttataacacattttata 442
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 tgtatacgcaggtggtaacttaattgtttatcatactatgtatttataacacattttata 199
Query: 443 aagaaagaagaattttacaagtggtctcaaacttttggc 481
|||||| || | ||| || |||||||||||||||||||
Sbjct: 200 aagaaataatattttaacttgtggtctcaaacttttggc 238
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 132,278
Number of extensions: 6727
Number of successful extensions: 6727
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6725
Number of HSP's successfully gapped: 3
Length of query: 840
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 823
Effective length of database: 8,119,229
Effective search space: 6682125467
Effective search space used: 6682125467
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 33 (65.9 bits)