BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15287 (UTR included)
(2482 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01059A1E07 963 0.0
BF14_2301_C1 335 2e-91
>BF01059A1E07
Length = 829
Score = 963 bits (486), Expect = 0.0
Identities = 553/574 (96%), Gaps = 1/574 (0%)
Strand = Plus / Plus
Query: 1375 gctatttacaggctgtgccaaatgtgcaaaggaaccaattacaacttgttggagtaacag 1434
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 1 gctatttacaggctgtgccaaatgtgcaaaggaatcaattacagcttgttggagtaacag 60
Query: 1435 caatgttcattgcaagcaagtatgaggagatctatgctccagatgtgggagactttgttt 1494
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 caatgttcattgcaagcaagtatgaggaaatctatgctccagatgtgggagactttgttt 120
Query: 1495 atgtgacagacaatgcttacacgaagtctgatgttttccaatgtgagagagatattatgt 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgtgacagacaatgcttacacgaagtctgatgttttccaatgtgagagagatattatgt 180
Query: 1555 ccaagctcggattttgtcttgcacggcccattccgttaagtttcttaagaaggtttgtga 1614
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 181 ccaagctcggattttgtcttgcacgccccattcccttaagtttcttaagaaggtttgtga 240
Query: 1615 aggcggctcatgggacctccaagaatcatcatctcgccaagtattttgttgatctcagtc 1674
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 241 aggcggctcatgggacctccaagaatcatcatcttgccaagtattttgttgatctcagtc 300
Query: 1675 ttattgaatattcaatggcacactatcgaccttccgaactagcagctgctgcattgtgtc 1734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttattgaatattcaatggcacactatcgaccttccgaactagcagctgctgcattgtgtc 360
Query: 1735 tgtccttatatcttctctcaacaaaaaaattaactgatgtttggactgccaccctgtctt 1794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtccttatatcttctctcaacaaaaaaattaactgatgtttggactgccaccctgtctt 420
Query: 1795 actactctgggtataaacttgaacacattgaaccaattatgcaaaaaattgcaaaaattg 1854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 actactctgggtataaacttgaacacattgaaccaattatgcaaaaaattgcaaaaattg 480
Query: 1855 ttatcaatgttgagaactctaaataccaagcaatctataataaatatctagatgtgacat 1914
|||| ||||||||||||||||||||| ||| | ||| ||||||| ||||||| ||||
Sbjct: 481 ttat-aatgttgagaactctaaatacagagctgtttatgataaatacttagatgtaacat 539
Query: 1915 tggcaaaagtatcaagtcttcctcagcttaaagg 1948
| || ||||| |||| |||||||||||||||||
Sbjct: 540 tagccaaagtttcaatgcttcctcagcttaaagg 573
>BF14_2301_C1
Length = 901
Score = 335 bits (169), Expect = 2e-91
Identities = 197/205 (96%), Gaps = 1/205 (0%)
Strand = Plus / Plus
Query: 1114 taccagaattaccacatgacattgaagatattgatgctaatgacaagaatagtcctttgc 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 taccagaattaccacatgacattgaagatattgatgctaatgacaagaatagtcctttgc 756
Query: 1174 taatgtccatttacattaaagacatttatagatatttgactgaacttgaaaagaagtacc 1233
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 757 taatgtccatttacattaaagacatttataaatatttgactgaacttgaaaagaagtatc 816
Query: 1234 caattgaaacagatcactt-aaaaaaccagactgtgatcactggcaagatgagagctact 1292
||||||||||||||||||| |||||||||||| | || |||||||||||||||||||||
Sbjct: 817 caattgaaacagatcacttaaaaaaaccagacagaaattactggcaagatgagagctact 876
Query: 1293 ttaattgactggttggtggaagtgc 1317
||||||||||||||||| |||||||
Sbjct: 877 ttaattgactggttggttgaagtgc 901
Score = 67.9 bits (34), Expect = 7e-11
Identities = 97/118 (82%)
Strand = Plus / Plus
Query: 495 agaattatggacattcaaatgagacggcatagaacggtgcaaattcaggatcaagaaaat 554
|||| ||||||| ||||| ||||| | || ||||||| |||| || || |||||||||
Sbjct: 87 agaaatatggacgttcaagtgagaagacaccgaacggtccaaaaccatgaccaagaaaat 146
Query: 555 gtatatattaccaaaaagataaatttacttattccaaacaaacgacaaggtttaagtg 612
| ||| |||||||||| ||||||| |||||||||| |||||||||||||| ||||
Sbjct: 147 ttttatgctaccaaaaaggtaaatttgcttattccaagtaaacgacaaggtttgagtg 204
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 364,425
Number of extensions: 7141
Number of successful extensions: 7141
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7139
Number of HSP's successfully gapped: 3
Length of query: 2482
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2465
Effective length of database: 8,119,229
Effective search space: 20013899485
Effective search space used: 20013899485
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)