BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15292 (UTR included)
(1981 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031B2F06 827 0.0
>BF01031B2F06
Length = 750
Score = 827 bits (417), Expect = 0.0
Identities = 423/425 (99%)
Strand = Plus / Minus
Query: 1557 gcgaaaagttggacgcagtattgaatattggacgcagtattgtttggtttcggtaggcat 1616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 gcgaaaagttggacgcagtattgaatattggacgcagtattgtttggtttcggtaggcat 650
Query: 1617 tcgttaatattgtagccaattatagtcaatttaataaatagctttttgtaagttgtatat 1676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tcgttaatattgtagccaattatagtcaatttaataaatagctttttgtaagttgtatat 590
Query: 1677 aacttttgtaaataaaatatcgcttccataagagctgaactgtgtacctttagtggatta 1736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 aacttttgtaaataaaatatcgcttccataagagctgaactgtgtacctttagtggatta 530
Query: 1737 ttgtaactacgctggagtaatgtatagatttattagaaaatgacaaaattaattattaaa 1796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ttgtaactacgctggagtaatgtatagatttattagaaaatgacaaaattaattattaaa 470
Query: 1797 cccataacaacattatatatagtgttaaaattaatatatataagggaatagattttcaaa 1856
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 cccataacaacattatataaagtgttaaaattaatatatataagggaatagattttcaaa 410
Query: 1857 atttcttctcattattatcattcaatagatatatacataggtagtaattattcattgtta 1916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 atttcttctcattattatcattcaatagatatatacataggtagtaattattcattgtta 350
Query: 1917 gcataacattatttgtaatacttttatcaattgttaaattaacttaagatgatttctttg 1976
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 349 gcataacattatttgtaatacttttattaattgttaaattaacttaagatgatttctttg 290
Query: 1977 taaaa 1981
|||||
Sbjct: 289 taaaa 285
Score = 83.8 bits (42), Expect = 1e-15
Identities = 42/42 (100%)
Strand = Plus / Minus
Query: 1408 gcaagacatgccccagcatgcaccgagacatgcattacaagg 1449
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 gcaagacatgccccagcatgcaccgagacatgcattacaagg 709
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 258,736
Number of extensions: 4969
Number of successful extensions: 4969
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4967
Number of HSP's successfully gapped: 2
Length of query: 1981
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1964
Effective length of database: 8,119,229
Effective search space: 15946165756
Effective search space used: 15946165756
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)