BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15296 (UTR included)
(2475 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2297_C1 1534 0.0
>BF14_2297_C1
Length = 794
Score = 1534 bits (774), Expect = 0.0
Identities = 789/794 (99%)
Strand = Plus / Plus
Query: 413 aaaagtcataacaataaaaattataaccaatatttatattttagtttggcatttggatat 472
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1 aaaagtcataacaataaaaattataaccaatatttatattttagtttggcaattggatat 60
Query: 473 attatgattaaacttttaattatatacaatgactacggtattctcaattaaagatattcc 532
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attatgattaaacttgtaattatatacaatgactacggtattctcaattaaagatattcc 120
Query: 533 agaattttcacaaaaggaaaagattgtagtagtaggcattattggaaaatcgccgtttcg 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaattttcacaaaaggaaaagattgtagtagtaggcattattggaaaatcgccgtttcg 180
Query: 593 atatccaaataagacatcaccactgctttcttcagtacaatttaaagaaaatgacataga 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atatccaaataagacatcaccactgctttcttcagtacaatttaaagaaaatgacataga 240
Query: 653 atgccattgggatgaaagacggagtattttatatcttcatgcagtcacttacttcgacac 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgccattgggatgaaagacggagtattttatatcttcatgcagtcacttacttcgacac 300
Query: 713 tgcgagattggcagcattggcagcagatttgaatgaggaatctcagagcacggtcaaaga 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgcgagattggcagcattggcagcagatttgaatgaggaatctcagagcacggtcaaaga 360
Query: 773 tgctgatgctgctcactggcttgtggcttctggagagttggcgatagatgcatgcagggc 832
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgctgatgctgctcactggctcgtggcttctggagagttggcgatagatgcatgcagggc 420
Query: 833 tatggcattgatatttcatttgtgccatattgtgattctttcattaccaacccctgtatt 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tatggcattgatatttcatttgtgccatattgtgattctttcattaccaacccctgtatt 480
Query: 893 tgatcttggatatttacagctttttaaagctattgatgcttacagaacagaggtatcagc 952
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgatctcggatatttacagctttttaaagctattgatgcttacagaacagaggtatcagc 540
Query: 953 acaaattacaagcgctttacaccaatcatgggcagctgcttggcagcatggtcggttatg 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acaaattacaagcgctttacaccaatcatgggcagctgcttggcagcatggtcggttatg 600
Query: 1013 ctgtcctcggctgctatttcacttcaaacgagcccccactccacttagagctgatcccgc 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctgtcctcggctgctatttcacttcaaacgagcccccactccacttagagctgatcccgc 660
Query: 1073 tggcctgaagagattggaacatgctgtggaggaccagatatacttcatactccggaagtc 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 661 tggcctgaagagattggaacatgctgtggaggaccagatatacttcatactccggaaatc 720
Query: 1133 ccgacttataactaatgtctgtgccaaatctctatttgctatacctaagaatgaggagtt 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccgacttataactaatgtctgtgccaaatctctatttgctatacctaagaatgaggagtt 780
Query: 1193 tgtgtatataagcg 1206
||||||||||||||
Sbjct: 781 tgtgtatataagcg 794
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 266,377
Number of extensions: 4981
Number of successful extensions: 4981
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4981
Number of HSP's successfully gapped: 1
Length of query: 2475
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2458
Effective length of database: 8,119,229
Effective search space: 19957064882
Effective search space used: 19957064882
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)