BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15318 (UTR included)
(1195 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042B2H12 1289 0.0
>BF01042B2H12
Length = 735
Score = 1289 bits (650), Expect = 0.0
Identities = 666/670 (99%), Gaps = 1/670 (0%)
Strand = Plus / Plus
Query: 474 gacaaatttaactgataatcaaataaaatggcaccaaaacagaggatgcgcatcgccaac 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 gacaaatttaactgataatcaaataaaatggcaccaaaacagaggatgcgcatcgccaac 126
Query: 534 gaaattgccagcaaaaatatcaccatgaggggaaatgtacctaaatcaacaaaggaaaag 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gaaattgccagcaaaaatatcaccatgaggggaaatgtacctaaatcaacaaaggaaaag 186
Query: 594 gatgatcagtatcctgtagcgccctggctgctggctctcttcatcttcgtagtctgtggc 653
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 gatgatcaatatcctgtagcgccctggctgctggctctcttcatcttcgtagtctgtggc 246
Query: 654 tccgccgtcttccaaataatccaatccattcgactcgcctaaaaactcctctccgactga 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tccgccgtcttccaaataatccaatccattcgactcgcctaaaaactcctctccgactga 306
Query: 714 taattttagaataaaaaaattatggcatagtattttctaccattcctttggcccgagact 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 taattttagaataaaaaaattatggcatagtattttctaccattcctttggcccgagact 366
Query: 774 gtaaatattttgctctcttgaaattacttttgccatttgctttataaacttcatctatgc 833
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 367 gtaaatattttgctctcttgaaattacttttgccatttgc-ttataaacttcatctatgc 425
Query: 834 cagtaacaagaattgtgatgttcccgatgtgtcctaactctccgctgtagctccaactaa 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 cagtaacaagaattgtgatgttcccgatgtgtcctaactctccgctgtagctccaactaa 485
Query: 894 tgtgttaaatattactgcattaattataatctcaatgtatgtactatattcttgtatatt 953
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tgtgttaaatattaccgcattaattataatctcaatgtatgtactatattcttgtatatt 545
Query: 954 attaaaattttatattaggcgtgaaatgcactgggcaatttgaattggaattttaaataa 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 attaaaattttatattaggcgtgaaatgcactgggcaatttgaattggaattttaaataa 605
Query: 1014 ttaaattgataacagtggaatttctttaattaaaaaatttaaatcgcccgttcagttcta 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ttaaattgataacagtggaatttctttaattaaaaaatttaaatcgcccgttcagttcta 665
Query: 1074 agcctaaaaagcatttcatatattttgattcctcgtttatttaagaccctctaaagacgc 1133
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 666 agcctaaaaagcatttcatatattttgattccttgtttatttaagaccctctaaagacgc 725
Query: 1134 acaatatgtt 1143
||||||||||
Sbjct: 726 acaatatgtt 735
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 223,105
Number of extensions: 7000
Number of successful extensions: 7000
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6999
Number of HSP's successfully gapped: 1
Length of query: 1195
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1178
Effective length of database: 8,119,229
Effective search space: 9564451762
Effective search space used: 9564451762
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)