BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15322 (UTR included)
(1807 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042A1A08 965 0.0
>BF01042A1A08
Length = 761
Score = 965 bits (487), Expect = 0.0
Identities = 499/502 (99%), Gaps = 1/502 (0%)
Strand = Plus / Plus
Query: 561 gtatcctggattcggaaacgtgatttgcacatcctgactgtgggtgttcacacatacagc 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gtatcctggattcggaaacgtgatttgcacatcctgactgtgggtgttcacacatacagc 319
Query: 621 agcgatgctcgattcgcagcacttcatgcggacggctctgatgaatggacactgagggta 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agcgatgctcgattcgcagcacttcatgcggacggctctgatgaatggacactgagggta 379
Query: 681 gcaccagctcaaccacgagactccggtgtatacgaatgccaagtgtctacagaacctaaa 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gcaccagctcaaccacgagactccggtgtatacgaatgccaagtgtctacagaacctaaa 439
Query: 741 attagtttgtcatttagactcaccgtcgttgtgtcgaaagctgaaattttatcggggccg 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 attagtttgtcatttagactcaccgtcgttgtgtcgaaagctgaaattttatcggggccg 499
Query: 801 gagctgtttgtgagggcgggttcagatattaatctcacttgcgtcgcaaaatacgctccc 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gagctgtttgtgagggcgggttcagatattaatctcacttgcgtcgcaaaatacgctccc 559
Query: 861 gatccccctagctttatatactggtatcgaggtgaacaagtggtaaactacgctcagcgc 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gatccccctagctttatatactggtatcgaggtgaacaagtggtaaactacgctcagcgc 619
Query: 921 ggtggaatcagtgttgaaactgagcaacgtacccgtacaagccgtctgctcattgcacgc 980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggtggaatcagtgttgaaactgagcaacgtacccgtacaagccgtctgctcattgcacgc 679
Query: 981 gccgcacctcatgactccggcaattacacatgtgcgccgagtagttcag-aatctgcttc 1039
||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||
Sbjct: 680 gccgcacctcatgactccggcaattacacctgtgcgccgagtagttcagnantctgcttc 739
Query: 1040 cgtgatcgtccacgtactgagt 1061
||||||||||||||||||||||
Sbjct: 740 cgtgatcgtccacgtactgagt 761
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 226,564
Number of extensions: 4558
Number of successful extensions: 4558
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4557
Number of HSP's successfully gapped: 1
Length of query: 1807
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1790
Effective length of database: 8,119,229
Effective search space: 14533419910
Effective search space used: 14533419910
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)