BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15346 (UTR included)
(1537 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1142_C1 1025 0.0
>BF14_1142_C1
Length = 818
Score = 1025 bits (517), Expect = 0.0
Identities = 523/525 (99%)
Strand = Plus / Plus
Query: 591 gggccaaactggactcttgtatctggattttccgaggggcaaactgcttgtgggaaagcc 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gggccaaactggactcttgtatctggattttccgaggggcaaactgcttgtgggaaagcc 353
Query: 651 gattacaaaaaacgtgtaatttgggcccaacatattgatttacattatgtaagcagagga 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gattacaaaaaacgtgtaatttgggcccaacatattgatttacattatgtaagcagagga 413
Query: 711 atgcaaggttggcctaagttaattgtgcaagtgagttgtcttgacgaaataggacgttcc 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 atgcaaggttggcctaagttaattgtgcaagtgagttgtcttgacgaaataggacgttcc 473
Query: 771 tgggtagttggttatggttcttctagtatcccagctgttcctggattccatagaatagaa 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tgggtagttggttatggttcttctagtatcccagctgttcctggattccatagaatagaa 533
Query: 831 attccatgttgggttcctgctgctactactatcactgataagttgagacaggattttatt 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 attccatgttgggttcctgctgctactactatcactgataagttgagacaggattttatt 593
Query: 891 gggggctctaatcagttgacagacacagatataatttacttaggaagtgataggtctaaa 950
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 594 gggggctctaatcagttgacagacacagatattatttacttaggaagtgataggtctaaa 653
Query: 951 cttaacactcagtcaaaaggaactgtaaagttagatatttatgtacttttaagaaatttt 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 cttaacactcagtcaaaaggaactgtaaagttagatatttatgtacttttaagaaatttt 713
Query: 1011 gcaaaatttggtgttgaatataaatgaaaaatgcagcctatagcgtacctttgcttcact 1070
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 714 gcaaaatttggtgttgaatataaatgaaaaatgcagcctatagcgtacctgtgcttcact 773
Query: 1071 ttactatctatacttatccaattttctcttttggattttataact 1115
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 ttactatctatacttatccaattttctcttttggattttataact 818
Score = 371 bits (187), Expect = e-102
Identities = 187/187 (100%)
Strand = Plus / Plus
Query: 406 ccaaaccacaaacagtgttgtataatggaaaatggctattaataattgtttaagggaaat 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccaaaccacaaacagtgttgtataatggaaaatggctattaataattgtttaagggaaat 60
Query: 466 agtattgaatttacctgagaatattatacggtctaatggcagaatttcatttttttggcc 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtattgaatttacctgagaatattatacggtctaatggcagaatttcatttttttggcc 120
Query: 526 agataacaagtgctagtaattttagtgaaacccattctttgttttgtcattattcgttac 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agataacaagtgctagtaattttagtgaaacccattctttgttttgtcattattcgttac 180
Query: 586 aagccgg 592
|||||||
Sbjct: 181 aagccgg 187
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 249,835
Number of extensions: 5406
Number of successful extensions: 5406
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5406
Number of HSP's successfully gapped: 2
Length of query: 1537
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1520
Effective length of database: 8,119,229
Effective search space: 12341228080
Effective search space used: 12341228080
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)