BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15364 (UTR included)
(1774 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01021B2D05 837 0.0
>BF01021B2D05
Length = 766
Score = 837 bits (422), Expect = 0.0
Identities = 470/486 (96%)
Strand = Plus / Plus
Query: 414 ggtatcacatggggtaacccagaaaatccaccggtactgctgtgccccggacgcatcgat 473
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 281 ggtatcacatggggtaacccggataatccaccggtactgctgtgccccggacgcatcgat 340
Query: 474 ccctgttgtctgttccggtatttggtgatgagattgcccagcaactttttttatgttgct 533
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 341 ccctgttgtctgttccgctatttggtgatgagattgcccagcaactctttttatgttgct 400
Query: 534 gtagatttgccgggcaacggtctctcggatcatttgccggtgggcatcaggttctctgtg 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gtagatttgccgggcaacggtctctcggatcatttgccggtgggcatcaggttctctgtg 460
Query: 594 tgggacttggtgccgactgtatccagagtcgctgatcattaccaatggaacaaatttatt 653
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 461 tgggacttggtgccgactgtatccagagtcgctgatcattaccaatggaaaaaatttatt 520
Query: 654 tacataggacattccctaggaacggccgtaggtaagcactatctcatggcttacccagaa 713
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 521 tacataggacattccctaggaacagccgtaggtaagcactatctgatggcttacccagag 580
Query: 714 cggctcactcgagttgtagaattggatcccgtgccagcgtatcacacggtattccccgag 773
|| ||||| | |||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 581 cgactcacaagggttgtagaattggaccccgtgccagcgtatcacacggtattcccagag 640
Query: 774 gaaatgaaggattggtaccacgaagtctacggcaaacattatgaggaacggcagtatagg 833
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 641 gaaatgaaggattggtaccacgaagtctacggcaaacattatgaggagcgacagtatagg 700
Query: 834 aaacacgcgggatccaaggctacggcacccagatatacttacgaccagataaagacttta 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 aaacacgcgggatccaaggctacggcacccagatatacttacgaccagataaagacttta 760
Query: 894 ttaatg 899
||||||
Sbjct: 761 ttaatg 766
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 361,552
Number of extensions: 22443
Number of successful extensions: 22443
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 22443
Number of HSP's successfully gapped: 1
Length of query: 1774
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1757
Effective length of database: 8,119,229
Effective search space: 14265485353
Effective search space used: 14265485353
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)