BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15374 (UTR included)
(3718 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01032A1C08 375 e-103
>BF01032A1C08
Length = 652
Score = 375 bits (189), Expect = e-103
Identities = 189/189 (100%)
Strand = Plus / Minus
Query: 1891 aggttgagttcaccgtggatcctttgtcatccttctccaacatgaacagccgccagtcag 1950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 aggttgagttcaccgtggatcctttgtcatccttctccaacatgaacagccgccagtcag 403
Query: 1951 ccatccgtatccagcacttgtctgctggttccgtacagttcgagtcccttgtggagcgag 2010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ccatccgtatccagcacttgtctgctggttccgtacagttcgagtcccttgtggagcgag 343
Query: 2011 gcgtccgcggggtcgtcaccaaggaagcgcattattccaacgagagtcccaacagaaact 2070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gcgtccgcggggtcgtcaccaaggaagcgcattattccaacgagagtcccaacagaaact 283
Query: 2071 caccgaatg 2079
|||||||||
Sbjct: 282 caccgaatg 274
Score = 180 bits (91), Expect = 1e-44
Identities = 91/91 (100%)
Strand = Plus / Minus
Query: 1805 catccgatgcgtagagcgtgagcagaccatgttcttccacttcgccgaggtgttgcgtct 1864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 catccgatgcgtagagcgtgagcagaccatgttcttccacttcgccgaggtgttgcgtct 593
Query: 1865 cggccaggagttaagtgttggcgacgaggtt 1895
|||||||||||||||||||||||||||||||
Sbjct: 592 cggccaggagttaagtgttggcgacgaggtt 562
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 337,322
Number of extensions: 5964
Number of successful extensions: 5964
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5964
Number of HSP's successfully gapped: 2
Length of query: 3718
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3700
Effective length of database: 8,109,745
Effective search space: 30006056500
Effective search space used: 30006056500
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)