BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15380 (UTR included)
(1540 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041B2A09 1166 0.0
>BF01041B2A09
Length = 799
Score = 1166 bits (588), Expect = 0.0
Identities = 617/629 (98%)
Strand = Plus / Plus
Query: 413 agcctcaggtgaccctaactatattgagttcctcccatcctggaatccagatgaggaagt 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 agcctcaggtgaccctaactatattgagttcctcccatcctggaatccagatgaggaagt 230
Query: 473 agatctccgtgcggacgtgtcgcggcacatgcgggtaataccggacttcgtgaatgaaac 532
|||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 231 ggatctccgggcggacgtgtcgcggcacatgcgggtaataccggagttcgtgaatgaaac 290
Query: 533 ggaagaggcggcactgctggccgacgtcgaacccaagcttaaaagaatgcgctatgaata 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ggaagaggcggcactgctggccgacgtcgaacccaagcttaaaagaatgcgctatgaata 350
Query: 593 tgaccactgggacaatgctatagaaggctaccgtgaaacggagcgagattcttggagccc 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tgaccactgggacaatgctatagaaggctaccgtgaaacggagcgagattcttggagccc 410
Query: 653 cctgtgttcagaggtgttgtcccgagtgcggcgtttgttccccgctggagcatcactgct 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 cctgtgttcagaggtgttgtcccgagtgcggcgtttgttccccgctggagcatcactgct 470
Query: 713 gccgcaagtgcatgtccttgatttggccgctgccgggcatattaaaccccacattgacgc 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gccgcaagtgcatgtccttgatttggccgctgccgggcatattaaaccccacattgacgc 530
Query: 773 tgtcagattttgcggtaacactattgctgggttatgtctgctgtcaagcgccgtgatgcg 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 tgtcagattttgcggtaacactattgctgggttatgtctgctgtcaagcgccgtgatgcg 590
Query: 833 tcttacacacgaaaagaaaccgcatattcagttggacgcgctgctggaacgacgagctct 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tcttacacacgaaaagaaaccgcatattcagttggacgcgctgctggaacgacgagctct 650
Query: 893 ctacatcatgagcggtgtggctcgctatgaattctctcatgcggttttgggtggtgagca 952
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 651 ctacatcatgagcggtgtggctcgctacgaattctctcatgcggttttgggtggtgagca 710
Query: 953 cagtttctttcgcgggaaacgtgtcatccgcggacggcgagtcgccgtgatatgcagaga 1012
||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 711 cagtttctttcgcggnnnncgtgtcatccgcggacggcgagtcgccgtgatatgcagnnn 770
Query: 1013 acaacccgataagtctacatctggatagt 1041
|||||||||||||||||||||||| ||||
Sbjct: 771 acaacccgataagtctacatctgggtagt 799
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 214,502
Number of extensions: 4850
Number of successful extensions: 4850
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4849
Number of HSP's successfully gapped: 1
Length of query: 1540
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1523
Effective length of database: 8,119,229
Effective search space: 12365585767
Effective search space used: 12365585767
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)