BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15393 (UTR included)
(2413 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1310_C1 2837 0.0
>BF14_1310_C1
Length = 2124
Score = 2837 bits (1431), Expect = 0.0
Identities = 1473/1486 (99%), Gaps = 2/1486 (0%)
Strand = Plus / Plus
Query: 928 ccgttagggacgctttgctatcggatccaaatggtgaaaggtttccgtggccagcgccac 987
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgttacggacgctttgctatcggatccaaatggtgaaaggtttccgtggccagcgccac 60
Query: 988 ccctggacgaagtactgaaaggagtgttgcttgaaggagcagagaagaagctgtatgagg 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccctggacgaagtactgaaaggagtgttgcttgaaggagcagagaagaagctgtatgagg 120
Query: 1048 aactacccattgatgctgtgagggtcttctattttgcagctcattggtgcccgccctgta 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aactacccattgatgctgtgagggtcttctattttgcagctcattggtgcccgccctgta 180
Query: 1108 gatcgttcgctcccggtctgtgcaccgctttgtctgcggtgcgcaagagacgctctaagt 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatcgttcgctcccggtctgtgcaccgctttgtctgcggtgcgcaagagacgctctaagt 240
Query: 1168 acgcgaacacacagcttatactcgtctccagtgatcgatcggagcaatcctacgcccgca 1227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acgcgaacacacagcttatactcgtctccagtgatcgatcggagcaatcctacgcccgca 300
Query: 1228 cgatagcgtccctaacaccagggttggcactatccgttccgtggtcatccccggctcgcc 1287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgatagcgtccctaacaccagggttggcactatccgttccgtggtcatccccggctcgcc 360
Query: 1288 tggcactgccggcagccctaggcgtagcgggtataccagcgctcgttatagctgatggta 1347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tggcactgccggcagccctaggcgtagcgggtataccagcgctcgttatagctgatggta 420
Query: 1348 ccgggaagatactcaccgccaatggaagacaacacctcaccgctgatccgacaggactta 1407
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 421 ccgggaagatactcaccgccaatggaagacaacacctcaccgctgatccgacaggactca 480
Query: 1408 acttcccatggtcgcagcgacccgtgtcggccctcaacgaacaggcgctcctcaaaatgg 1467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acttcccatggtcgcagcgacccgtgtcggccctcaacgaacaggcgctcctcaaaatgg 540
Query: 1468 cgagacaccccgctgttgtgctgttcgttgacgacgaggacgccgagatagaattctccg 1527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cgagacaccccgctgttgtgctgttcgttgacgacgaggacgccgagatagaattctccg 600
Query: 1528 aatccgttttggctccatcggccgaatcctactacgaggagtgcagcatccagtatccag 1587
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 601 aatccgttttggctccatcggccgaatcctactacgaggagtgcagcatccagtacccag 660
Query: 1588 gattctgtccgtaccagaactcctccgacgacgagagtatggacttcgactactccacca 1647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gattctgtccgtaccagaactcctccgacgacgagagtatggacttcgactactccacca 720
Query: 1648 agacctctcgcaagaagaaacccttcaagcacgtgatgttctacatcggtatagacggca 1707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 agacctctcgcaagaagaaacccttcaagcacgtgatgttctacatcggtatagacggca 780
Query: 1708 cggacagcgcggacatgatcagggagcacatcggcctagacgacgccgtcccattgctaa 1767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cggacagcgcggacatgatcagggagcacatcggcctagacgacgccgtcccattgctaa 840
Query: 1768 cagccatcgacttccccaaacaacgcatggtcaccatgaaatatggagacgagatcacca 1827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 cagccatcgacttccccaaacaacgcatggtcaccatgaaatatggagacgagatcacca 900
Query: 1828 ctgattcggtgcagaatttcgtcgatgcattcctaagtggcaacgccgacttcaaacccc 1887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ctgattcggtgcagaatttcgtcgatgcattcctaagtggcaacgccgacttcaaacccc 960
Query: 1888 tcaaaccgtatacacagaaatgttgagaaattataaaaaaaaaaatataatttctaggaa 1947
|||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 961 tcaaaccgtacacacagaaatgttgagaaat--taaaaaaaaatatataatttctaggaa 1018
Query: 1948 atcatttttcttaatatccaaataatcatattagagaaatagcacttatgtcgttcttcg 2007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1019 atcatttttcttaatatccaaataatcatattagagaaatagcacttatgtcgttcttcg 1078
Query: 2008 ctaaaacagagttgacatagtagaaattgctagctctaggacgtagtcggctgtaacaat 2067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1079 ctaaaacagagttgacatagtagaaattgctagctctaggacgtagtcggctgtaacaat 1138
Query: 2068 taagagattcagctgaggtttttcaaaaattatttccattagaattttattaagtaatat 2127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1139 taagagattcagctgaggtttttcaaaaattatttccattagaattttattaagtaatat 1198
Query: 2128 tagagaacgttagatttaatatagttttgtaatcgatctgtagatttagatgtttagatt 2187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1199 tagagaacgttagatttaatatagttttgtaatcgatctgtagatttagatgtttagatt 1258
Query: 2188 tttcaagtacattttaacttaaaatattaaaattcgaagcacaaaccgacgaaaaataca 2247
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1259 tttcaagtacattttaacttaaaatattaaaattcgaagcacaaaccgacaaaaaataca 1318
Query: 2248 tttttaaaattgactacgtgtatagcgttataccaagccaagctatttaaattaaaataa 2307
|||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||
Sbjct: 1319 tttttaaaattgactacgtgaatagcgttaaaccaaaccaagctatttaaattaaaataa 1378
Query: 2308 aataatacaattccaaaagtttatacaattgcatttattaacttttaacaaagaggtttc 2367
|||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1379 aataatacaattgcaaaagtttatacaattgcatttattaacttttaacgaagaggtttc 1438
Query: 2368 aattgaactgtgtatttttgtgtgtttgtgcagtttccttgtttat 2413
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1439 aattgaactgtgtatttttgtgtgtttgtgcagtttccttgtttat 1484
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 300,647
Number of extensions: 8430
Number of successful extensions: 8430
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8428
Number of HSP's successfully gapped: 1
Length of query: 2413
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2396
Effective length of database: 8,119,229
Effective search space: 19453672684
Effective search space used: 19453672684
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)