BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15394 (UTR included)
(2278 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1171_C1 2187 0.0
>BF14_1171_C1
Length = 1107
Score = 2187 bits (1103), Expect = 0.0
Identities = 1106/1107 (99%)
Strand = Plus / Plus
Query: 391 tttcgttgattcaaccgacgccattattaaactcttcctttccaatatttcacgtgctat 450
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttcgtcgattcaaccgacgccattattaaactcttcctttccaatatttcacgtgctat 60
Query: 451 atctatactgttatttactcgtcgtgcattttccaataatcactaaagacatggctgata 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atctatactgttatttactcgtcgtgcattttccaataatcactaaagacatggctgata 120
Query: 511 acgacgatcttctcgactatgaagatgaagagcaggcagatcaacagaacgttgacggag 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acgacgatcttctcgactatgaagatgaagagcaggcagatcaacagaacgttgacggag 180
Query: 571 cgaccgaagcggcgccaaaaaaggaggttaagggttcctacgtatcgattcacagctctg 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgaccgaagcggcgccaaaaaaggaggttaagggttcctacgtatcgattcacagctctg 240
Query: 631 gctttagggactttctccttaagcctgagattctacgagccatagtggactgtggtttcg 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctttagggactttctccttaagcctgagattctacgagccatagtggactgtggtttcg 300
Query: 691 aacatccatcagaagttcaacatgaatgtattcctcaagcggtactgggtatggatatct 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacatccatcagaagttcaacatgaatgtattcctcaagcggtactgggtatggatatct 360
Query: 751 tatgccaagctaagtccggtatgggcaaaaccgcggtgtttgtactagccacgttacagc 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tatgccaagctaagtccggtatgggcaaaaccgcggtgtttgtactagccacgttacagc 420
Query: 811 aactagagccttcggataatcatgtttatgttcttgtcatgtgccacacccgagaattag 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aactagagccttcggataatcatgtttatgttcttgtcatgtgccacacccgagaattag 480
Query: 871 cttttcaaatcagcaaagagtatgaacgcttttctaagtacatggccggcgtccgtgtgt 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cttttcaaatcagcaaagagtatgaacgcttttctaagtacatggccggcgtccgtgtgt 540
Query: 931 cagttttctttggcggcatgccgattcaaaaagatgaggatgttttaaaaactgcatgcc 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cagttttctttggcggcatgccgattcaaaaagatgaggatgttttaaaaactgcatgcc 600
Query: 991 ctcatatcgtcgttgggacaccaggacgtattttagccctcgttaacaataagaaattaa 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctcatatcgtcgttgggacaccaggacgtattttagccctcgttaacaataagaaattaa 660
Query: 1051 acttgaaacatctaaaacatttcatacttgatgaatgcgacaagatgttggaatctctgg 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 acttgaaacatctaaaacatttcatacttgatgaatgcgacaagatgttggaatctctgg 720
Query: 1111 atatgagaagagatgtgcaagaaatattccgaaacactcctcatgggaaacaagtgatga 1170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atatgagaagagatgtgcaagaaatattccgaaacactcctcatgggaaacaagtgatga 780
Query: 1171 tgttttctgccactttgagtaaagatatcagacccgtatgtaagaaattcatgcaggacc 1230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tgttttctgccactttgagtaaagatatcagacccgtatgtaagaaattcatgcaggacc 840
Query: 1231 ccatggaagtgtatgttgatgatgaagcaaaacttactctgcatggacttcagcagcact 1290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ccatggaagtgtatgttgatgatgaagcaaaacttactctgcatggacttcagcagcact 900
Query: 1291 atgtgaaacttaaagaaaatgagaagaataagaagttatttgaactcttagatgtgttgg 1350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 atgtgaaacttaaagaaaatgagaagaataagaagttatttgaactcttagatgtgttgg 960
Query: 1351 aattcaaccaagtagttatatttgtaaaatcggttcaaagatgcatagctctagcacaac 1410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 aattcaaccaagtagttatatttgtaaaatcggttcaaagatgcatagctctagcacaac 1020
Query: 1411 ttttgacggaccaaaacttccctgccattggaattcatagaaacatgacacaagacgagc 1470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ttttgacggaccaaaacttccctgccattggaattcatagaaacatgacacaagacgagc 1080
Query: 1471 gtctttcccgttaccaacagttcaaag 1497
|||||||||||||||||||||||||||
Sbjct: 1081 gtctttcccgttaccaacagttcaaag 1107
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 298,557
Number of extensions: 6167
Number of successful extensions: 6167
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6167
Number of HSP's successfully gapped: 1
Length of query: 2278
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2261
Effective length of database: 8,119,229
Effective search space: 18357576769
Effective search space used: 18357576769
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)