BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15395 (UTR included)
(2218 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1848_C1 1481 0.0
BF01055B1C02 408 e-113
>BF14_1848_C1
Length = 773
Score = 1481 bits (747), Expect = 0.0
Identities = 766/771 (99%), Gaps = 1/771 (0%)
Strand = Plus / Minus
Query: 497 aaatatgtcccgtgttttgtttactgaaaaaatcggctttagaagtcatgcaggattttt 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 aaatatgtcccgtgttttgtttactgaaaaaatcggctttagaagtcatgcaggattttt 712
Query: 557 aactattaatgctaagtataattccaacctatacttttggtacttcccacc-ttttaatg 615
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 711 aactattaatgctaagtataattccaacctatacttttggtacttcccaccnttttaatg 652
Query: 616 aaaacactggagcacctgttgtattatggcttcagggtggtccaggaggaagttcattgt 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 aaaacactggagcacctgttgtattatggcttcagggtggtccaggaggaagttcattgt 592
Query: 676 ttggcttatttacagaaaatggtcccctcatagccagaaaagatggattctcattgagaa 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 ttggcttatttacagaaaatggtcccctcatagccagaaaagatggattctcattgagaa 532
Query: 736 aataccattgggctcatgaaaattatcttatttatattgacaacccagtcggaacaggat 795
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 531 aataccattgggctcatgaaaatcatcttatttatattgacaacccagtcggaacaggat 472
Query: 796 ttagttttacagataatgaaaatggttactgttctgacgaaaattgtgtagcaaaaggtt 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ttagttttacagataatgaaaatggttactgttctgacgaaaattgtgtagcaaaaggtt 412
Query: 856 tgtacaactttttgcagcaattttacaagctttttccacatttaaggaataataattttt 915
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 411 tgtacaactttttgcagcaattttacaagctttttccacagttaaggaataataattttt 352
Query: 916 tcattagtggagaatcatatgcagggaaataccttccctccttagctatggaaattcatc 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tcattagtggagaatcatatgcagggaaataccttccctccttagctatggaaattcatc 292
Query: 976 agcaaaaccatcgagggttgactaagataaacttaaagggactagctttgggaaatgctt 1035
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 agcaaaaccatctagggttgactaagataaacttaaagggactagctttgggaaatgctt 232
Query: 1036 actgtgatccgttgaaccagatggattatggaaattatctctaccaacatggcatgatag 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 actgtgatccgttgaaccagatggattatggaaattatctctaccaacatggcatgatag 172
Query: 1096 atgataaacaaaaattagttttcctcaagatgcagaagaaaatatctgatgaaatcaaga 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 atgataaacaaaaattagttttcctcaagatgcagaagaaaatatctgatgaaatcaaga 112
Query: 1156 aacaaaattgggctgaagctggcattctaatgaacacattaatggatggagacctcacta 1215
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 aacagaattgggctgaagctggcattctaatgaacacattaatggatggagacctcacta 52
Query: 1216 acttctcgtattttaacaactatacaggctttgataattattacaacatac 1266
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 acttctcgtattttaacaactatacaggctttgataattattacaacatac 1
>BF01055B1C02
Length = 229
Score = 408 bits (206), Expect = e-113
Identities = 209/210 (99%)
Strand = Plus / Minus
Query: 1743 tttttttgtaatgaacaaagtacagctttattatttttctcatatctttaatgtattttc 1802
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 tttttttttaatgaacaaagtacagctttattatttttctcatatctttaatgtattttc 159
Query: 1803 attatatttttgtttttgtagtcattccttacatgttttttattggaattggatctgata 1862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 attatatttttgtttttgtagtcattccttacatgttttttattggaattggatctgata 99
Query: 1863 ataatttgagataaaacacgatttgtgatatttttatgcctttctgatgtatctatgatg 1922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 ataatttgagataaaacacgatttgtgatatttttatgcctttctgatgtatctatgatg 39
Query: 1923 cactatgactgttgtctttatttattaaaa 1952
||||||||||||||||||||||||||||||
Sbjct: 38 cactatgactgttgtctttatttattaaaa 9
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 356,194
Number of extensions: 8748
Number of successful extensions: 8748
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8747
Number of HSP's successfully gapped: 2
Length of query: 2218
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2201
Effective length of database: 8,119,229
Effective search space: 17870423029
Effective search space used: 17870423029
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)