BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15398 (UTR included)
(2716 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025B1E11 145 4e-34
BF14_2430_C1 143 2e-33
BF01051A1D12 129 3e-29
BF14_1645_C1 86 3e-16
>BF01025B1E11
Length = 786
Score = 145 bits (73), Expect = 4e-34
Identities = 136/157 (86%)
Strand = Plus / Plus
Query: 190 ttagatctactaacaaagttcctcattgtgacttcagtcgaagctgttaaattttattac 249
||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||| |
Sbjct: 115 ttagatctactaacaaagttcctaattgtgacttcagtcggggctgtaaaattttatttc 174
Query: 250 atttctaagttaatcccggattgtgtcgcctccattcaacacgacactggtagaatatac 309
||| ||||||||||||||| |||| ||||||||| |||||| ||||| ||||||||
Sbjct: 175 attcaaaagttaatcccggatcgtgtttcctccattctacacgatactggcagaatatat 234
Query: 310 tgtgcacgttttttcatggatgaatgccacatttaaa 346
||||||||| || || ||||||| |||| |||||||
Sbjct: 235 tgtgcacgtccttgcacggatgaaggccatatttaaa 271
>BF14_2430_C1
Length = 830
Score = 143 bits (72), Expect = 2e-33
Identities = 132/152 (86%)
Strand = Plus / Plus
Query: 201 aacaaagttcctcattgtgacttcagtcgaagctgttaaattttattacatttctaagtt 260
|||||||||||| ||||| ||||||||||| |||||||||| ||||| ||| ||||||
Sbjct: 90 aacaaagttcctaattgttacttcagtcgaggctgttaaatcttattgtattcataagtt 149
Query: 261 aatcccggattgtgtcgcctccattcaacacgacactggtagaatatactgtgcacgttt 320
|||||||||| |||| ||||||||| |||||||||||| |||||||||||||||| | |
Sbjct: 150 aatcccggatcgtgtttcctccattctacacgacactggcagaatatactgtgcacatct 209
Query: 321 tttcatggatgaatgccacatttaaaacaacc 352
|| || | ||||| |||| |||||||||||||
Sbjct: 210 ttgcacgtatgaaggccatatttaaaacaacc 241
>BF01051A1D12
Length = 812
Score = 129 bits (65), Expect = 3e-29
Identities = 110/125 (88%)
Strand = Plus / Plus
Query: 194 atctactaacaaagttcctcattgtgacttcagtcgaagctgttaaattttattacattt 253
|||||||| |||||||||| |||||| || |||||||||||||||||||||||| |||||
Sbjct: 144 atctactaccaaagttcctgattgtgtctccagtcgaagctgttaaattttattccattt 203
Query: 254 ctaagttaatcccggattgtgtcgcctccattcaacacgacactggtagaatatactgtg 313
||||||||||||||||| ||||| || || | |||||||||||| |||||| |||||
Sbjct: 204 ctaagttaatcccggatcgtgtctaatctatgctacacgacactggcagaatagactgta 263
Query: 314 cacgt 318
|||||
Sbjct: 264 cacgt 268
>BF14_1645_C1
Length = 793
Score = 85.7 bits (43), Expect = 3e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 256 aagttaatcccggattgtgtcgcctccattcaacacgacactggtagaatatactgtgca 315
||||||||||||||| ||| | ||||||||| |||||||||||| |||||||||||||||
Sbjct: 95 aagttaatcccggatcgtgcctcctccattctacacgacactggcagaatatactgtgca 154
Query: 316 cgt 318
|||
Sbjct: 155 cgt 157
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 324,935
Number of extensions: 6966
Number of successful extensions: 6966
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 6965
Number of HSP's successfully gapped: 4
Length of query: 2716
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2699
Effective length of database: 8,119,229
Effective search space: 21913799071
Effective search space used: 21913799071
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)