BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15427 (UTR included)
(5062 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040A1E02 1564 0.0
>BF01040A1E02
Length = 830
Score = 1564 bits (789), Expect = 0.0
Identities = 819/830 (98%)
Strand = Plus / Plus
Query: 2778 aaaggggaccacttccaaagagaatctatattggatgttattcgacttcttgtattgtac 2837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaggggaccacttccaaagagaatctatattggatgttattcgacttcttgtattgtac 60
Query: 2838 cagacttctgagaaaattgagaatctctttgacgactgggtctatccactgtgtgaaact 2897
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 61 cagacttctgagaaaattgagaatctctttgacaactgggtctatccactgtgcgaaact 120
Query: 2898 gtattggaagctccgaagaaatataaaaaggccagaaaggaggaaggtgaagagaagacc 2957
|||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 121 gtattggaagctccgaagaaatataaaaaggccagaaaagaggaagatgaagagaagacc 180
Query: 2958 caacagttgaaatataaagatatggcgaaattaattgaaatggaacataagaaagcttac 3017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caacagttgaaatataaagatatggcgaaattaattgaaatggaacataagaaagcttac 240
Query: 3018 agaatattagaggaaatattcaaaagtgataaagactcttgcaaagaatttgtgaccaat 3077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agaatattagaggaaatattcaaaagtgataaagactcttgcaaagaatttgtgaccaat 300
Query: 3078 aataataagaagataatgaaattactaatgcgctcattgaataaggcagctgatagcagt 3137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aataataagaagataatgaaattactaatgcgctcattgaataaggcagctgatagcagt 360
Query: 3138 aaaggtgctaggttgagatgtatagaccacttgatatcagtctcccctaaactaacatca 3197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaaggtgctaggttgagatgtatagaccacttgatatcagtctcccctaaactaacatca 420
Query: 3198 gaacacaaacttatcaagagtgctctagcagaagcaatcatctgtacaaaggatatcaac 3257
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaacacaagcttatcaagagtgctctagcagaagcaatcatctgtacaaaggatatcaac 480
Query: 3258 tctaagtgtaggcagtgcgccttcacagtcattactagtattggaaatgttctgaaggaa 3317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tctaagtgtaggcagtgcgccttcacagtcattactagtattggaaatgttctgaaggaa 540
Query: 3318 caggacggaggaatacaatccttcatagaccttttattaagtggtgtgtcaagtccccgt 3377
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 541 caggacggaggaatacaatccttcatagaccttttattaagcggtgtgtcaagtccccgt 600
Query: 3378 gtgacatcatgttccctacgagccttagctgcggccttattcaatttctatggagatatg 3437
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 601 gtgacatcatgttccctacgagccttagctgcggcattgttcaatttctatggagatatg 660
Query: 3438 gagctgaccgctgtccagggtttattggagactgtttccaagctgatgatggagagcaac 3497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gagctgaccgctgtccagggtttattggagactgtttccaagctgatgatggagagcaac 720
Query: 3498 agggaggttgtcgcggctggaatgagcttcttgaaggtatacacaaaggttttgccaacc 3557
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 721 agggaggttgtcgcggctggaatgagcttcttgannntatacacaaaggttttgccaacc 780
Query: 3558 gaagtactagctggcagtctgcctctaatattcaaaacattatcatctat 3607
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gaagtactagctggcagtctgcctctaatattcaaaacattatcatctat 830
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 523,162
Number of extensions: 9479
Number of successful extensions: 9479
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9479
Number of HSP's successfully gapped: 1
Length of query: 5062
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5044
Effective length of database: 8,109,745
Effective search space: 40905553780
Effective search space used: 40905553780
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)