BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15428 (UTR included)
(1495 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056B2E03 1544 0.0
>BF01056B2E03
Length = 783
Score = 1544 bits (779), Expect = 0.0
Identities = 782/783 (99%)
Strand = Plus / Plus
Query: 397 tttataaaaatgctaatggaccgtaaatgattgataggaaattaattgcatataccgact 456
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttataaaaatactaatggaccgtaaatgattgataggaaattaattgcatataccgact 60
Query: 457 atgtcggtaacgtttgaccgtcatactagcatatcggcatataaatgtttctcaaaagtt 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgtcggtaacgtttgaccgtcatactagcatatcggcatataaatgtttctcaaaagtt 120
Query: 517 tgtgcaaatctatcctttttggagtacccataggcataaccttccttgacacagtgggat 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtgcaaatctatcctttttggagtacccataggcataaccttccttgacacagtgggat 180
Query: 577 atgtcgcacgagtggaaggaatttccatgcaaccagttctcaatcccggaaccaagaata 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgtcgcacgagtggaaggaatttccatgcaaccagttctcaatcccggaaccaagaata 240
Query: 637 ccgattacgtatttttgtcgcgatggtcagtaagagattatcaagttaaaagaggtgatg 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccgattacgtatttttgtcgcgatggtcagtaagagattatcaagttaaaagaggtgatg 300
Query: 697 ttatctcactggtgtcacctaaagaccctaatcagaagattataaagcgagtcgtagctc 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttatctcactggtgtcacctaaagaccctaatcagaagattataaagcgagtcgtagctc 360
Query: 757 tggaaggtgatgttgtaaatacacttggttacaagaatcaatatgtaaaaatccctgaag 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tggaaggtgatgttgtaaatacacttggttacaagaatcaatatgtaaaaatccctgaag 420
Query: 817 gccactgttgggttgaaggtgatcacacaggtcatacattggatagcaacacatttggtc 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gccactgttgggttgaaggtgatcacacaggtcatacattggatagcaacacatttggtc 480
Query: 877 cggtatcattaggtctgattaatgctaaagccctttgcatagtttggccacccagcaggt 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cggtatcattaggtctgattaatgctaaagccctttgcatagtttggccacccagcaggt 540
Query: 937 ggcagaatttggaagctaagctgccaaacaacagaactcctatcagtaaatcaatatgaa 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggcagaatttggaagctaagctgccaaacaacagaactcctatcagtaaatcaatatgaa 600
Query: 997 tgtctgtgtatatatgttttgtagatatacatgttgtaattattatttataaattcaagt 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgtctgtgtatatatgttttgtagatatacatgttgtaattattatttataaattcaagt 660
Query: 1057 agaatgtttgcattgcccgaattctagtagatagatttttaaagaatttatatttgaaat 1116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agaatgtttgcattgcccgaattctagtagatagatttttaaagaatttatatttgaaat 720
Query: 1117 taattttgttagttattatttatgaatagtatattattttggtgacaatgagataagcta 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 taattttgttagttattatttatgaatagtatattattttggtgacaatgagataagcta 780
Query: 1177 aat 1179
|||
Sbjct: 781 aat 783
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 292,015
Number of extensions: 17004
Number of successful extensions: 17004
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 17004
Number of HSP's successfully gapped: 1
Length of query: 1495
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1478
Effective length of database: 8,119,229
Effective search space: 12000220462
Effective search space used: 12000220462
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)