BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15432 (UTR included)
(1645 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_395_C1 1546 0.0
>BF14_395_C1
Length = 850
Score = 1546 bits (780), Expect = 0.0
Identities = 792/796 (99%)
Strand = Plus / Plus
Query: 292 attcacgtgtaaaaaaaaaaacaatgtttcgccattggttgtttttcgcaagcgcggtgt 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 attcacgtgtaaaaaaaaaaacaatgtttcgccattggttgtttttcgcaagcgcggtgt 114
Query: 352 acttggcctgctactgcagcgggaattattgtagggacaacaatctctgttgtcctggcc 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 acttggcctgctactgcagcgggaattattgtagggacaacaatctctgttgtcctggcc 174
Query: 412 gggacagtgcttgcgtcgtgcaaaaagctcaccagaacgcgattattgatgatcccctcg 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 gggacagtgcttgcgtcgtgcaaaaagctcaccagaacgcgattattgatgatcccctcg 234
Query: 472 acaagccgtgttactgtgaccatgcttgcatgaaacttggcgactgctgtcctgacttca 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 acaagccgtgttactgtgaccatgcttgcatgaaacttggcgactgctgtcctgacttca 294
Query: 532 gggaaacttgcggagtattggattgcgtggtatctggttggggagagtggtcagaatgtg 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gggaaacttgcggagtattggattgcgtggtatctggttggggagagtggtcagaatgtg 354
Query: 592 acaatgagtgtggttcgggcagcatgatgcggagtcgtcgtgtagtgcaggcaccggctc 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 acaatgagtgtggttcgggcagcatgatgcggagtcgtcgtgtagtgcaggcaccggctc 414
Query: 652 gcggtggaaaacattgcccgacattggtacaaagaagggcttgtcaatcccaccacggtt 711
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gcggtggaaaacactgtccgacattggtacaaagaagggcttgtcaatcccaccacggtt 474
Query: 712 gcactgaagagagtgacataccattacgcgaggaatcggcgatgattctacctggctcac 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gcactgaagagagtgacataccattacgcgaggaatcggcgatgattctacctggctcac 534
Query: 772 tgtctataagtcgtcattccgatgaaagtgttgatatcaggaagaatttgcgtctacgca 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tgtctataagtcgtcattccgatgaaagtgttgatatcaggaagaatttgcgtctacgca 594
Query: 832 atcctgatgacccggaatcaaactctcatagggagtactgcgttcaatatgaggttacga 891
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 atcctgatgacccagaatcgaactctcatagggagtactgcgttcaatatgaggttacga 654
Query: 892 aagtatccaaggcctgccacactgactccgattacaaagctctacgagagggtgctaccg 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 aagtatccaaggcctgccacactgactccgattacaaagctctacgagagggtgctaccg 714
Query: 952 tatgtgtcatgtgcgagacggcagctctaagacgtgatctcaaatggcgttgcggcggcc 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 tatgtgtcatgtgcgagacggcagctctaagacgtgatctcaaatggcgttgcggcggcc 774
Query: 1012 acggcgtatctggacacgcaacacgtttttacgctctcgtggctccacactgccacggaa 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 acggcgtatctggacacgcaacacgtttttacgctctcgtggctccacactgccacggaa 834
Query: 1072 aatggatccgcgcatc 1087
||||||||||||||||
Sbjct: 835 aatggatccgcgcatc 850
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 255,255
Number of extensions: 6604
Number of successful extensions: 6604
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6604
Number of HSP's successfully gapped: 1
Length of query: 1645
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1628
Effective length of database: 8,119,229
Effective search space: 13218104812
Effective search space used: 13218104812
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)