BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15440 (UTR included)
(2407 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044A1H03 1025 0.0
BF01039B2E07 74 1e-12
>BF01044A1H03
Length = 619
Score = 1025 bits (517), Expect = 0.0
Identities = 564/581 (97%)
Strand = Plus / Minus
Query: 1553 agtgccaggattagcagtgagcgttcgaactccagcgcttgctttactattgctcgcttc 1612
||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 619 agtgccaggattagcagtgagcgttcgaattccagcgcttgctttnntattgctcgcttc 560
Query: 1613 agcggtatctccttttctttttgctctgcgttcacgacgggtacagcgtgaagcacggcg 1672
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 559 agcggtatctccttttctttttgctcggcgttcacgacgggtacagcgtgaagcacggcg 500
Query: 1673 tatgtttctacgagaaaagagcccgtgggatcgcgtagcgggtgcagcgtcgtcagcggc 1732
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tatgtttnnacgagaaaagagcccgtgggatcgcgtagcgggtgcagcgtcgtcagcggc 440
Query: 1733 tgctgatggacagcgtgctcgtgctgctttagatttgctgcgaacgttgacaccgggagt 1792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tgctgatggacagcgtgctcgtgctgctttagatttgctgcgaacgttgacaccgggagt 380
Query: 1793 tgatgaagtggagaatgcagatcgtggtacggcacctgaaactggaagcgaagtgtaccg 1852
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 379 tgatgaagtggagaatgcagatcgtggtacggcacctgaaactggaagggaagtgtaccg 320
Query: 1853 cagctccttcagctctggtggtagcacacagctgtcatctgcttcagaagagtgacacac 1912
|||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 319 cagctccttcagttctggtggtagcacacagctgtcatctgtttcagaagagtgacacac 260
Query: 1913 tctctggcgcccatcgaagtcttcgaaggtgcgcttcactacccgacccaccgctgtttt 1972
| |||||||||||| ||||| || ||||||||||||||||||| ||||||||||||||||
Sbjct: 259 tttctggcgcccatggaagttttggaaggtgcgcttcactaccggacccaccgctgtttt 200
Query: 1973 catctgtgatactagtataagaggaccagcgctcggcgcgaccgtcagactgatatagtg 2032
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 199 catctgtgatactagtataagaggaccagcgcttggcgcgaccgtcagactgatatagtg 140
Query: 2033 taagataatttattagtaagtccatgtacctttccgctgagcggacaaattttattacct 2092
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 139 taagataatttattagtaagtccatgtacctttccgcggagcggacaaattttattccct 80
Query: 2093 gacattaatgtattgaagaaaaataaaaatcatattataat 2133
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 gacattaatgtattgaagaaaaataaaaatcatattataat 39
>BF01039B2E07
Length = 557
Score = 73.8 bits (37), Expect = 1e-12
Identities = 106/129 (82%)
Strand = Plus / Minus
Query: 1736 tgatggacagcgtgctcgtgctgctttagatttgctgcgaacgttgacaccgggagttga 1795
||||||| || | ||||| ||||||||| |||||| | |||||||| | ||||| |||||
Sbjct: 445 tgatggaaagggggctcgggctgctttaaatttgcggggaacgttgcccccgggggttga 386
Query: 1796 tgaagtggagaatgcagatcgtggtacggcacctgaaactggaagcgaagtgtaccgcag 1855
||||| || |||| || | ||||| |||| || ||||||||||| |||| || || |||
Sbjct: 385 tgaaggggggaatccaatttgtggttcggcccccgaaactggaagggaagggtcccccag 326
Query: 1856 ctccttcag 1864
|||||||||
Sbjct: 325 ctccttcag 317
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 257,536
Number of extensions: 5070
Number of successful extensions: 5070
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5070
Number of HSP's successfully gapped: 2
Length of query: 2407
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2390
Effective length of database: 8,119,229
Effective search space: 19404957310
Effective search space used: 19404957310
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)