BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15444 (UTR included)
(2161 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055B2D11 1437 0.0
>BF01055B2D11
Length = 729
Score = 1437 bits (725), Expect = 0.0
Identities = 728/729 (99%)
Strand = Plus / Plus
Query: 397 aaaatacaacaaatacttaaaattcagcagtgtgttttttcgtctagaagttataatgtt 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaatacaacaaatacttaaaattcagcagtgtgttttttcgtctagaagttataatgtt 60
Query: 457 ccatttttctataaaataattattacattttaattaaaataaaaatgaaatgtcacgtac 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccatttttctataaaataattattacattttaattaaaataaaaatgaaatgtcacgtac 120
Query: 517 ctggtccgaatgttaaagttttagcaagaactgttcatgctttagcaagatttggtgatg 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctggtccgaatgttaaagttttagcaagaactgttcatgctttagcaagatttggtgatg 180
Query: 577 aattgtatttggaatccctcccagattgtatactattgagaacactcaatgcctccgaaa 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aattgtatttggaatccctcccagattgtatactattgagaacactcaatgcctccgaaa 240
Query: 637 gcgcctatgcaatggttaaattaaacaaaaatttcttttcgcattttaattataattatt 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcgcctatgcaatggttaaattaaacaaaaatttcttttcgcattttaattataattatt 300
Query: 697 attctatagaaaatgatggattaaaatgtaaaatttccatgaaatctgcattaaatgctt 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attctatagaaaatgatggattaaaatgtaaaatttccatgaaatctgcattaaatgctt 360
Query: 757 ttaaatcccctgcacatatggacaaacaggttgagaatcttgagattaaacttgatcctc 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttaaatcccctgcacatatggacaaacaggttgagaatcttgagattaaacttgatcctc 420
Query: 817 actcttcaaaattaatatttcaactcaaatgtaagcatggtattgttaagacccattatg 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 actcttcaaaattaatatttcaactcaaatgtaagcatggtattgttaagacccattatg 480
Query: 877 tgtcaatattggattgcaaagccatgcaagcaatttacacaaaagatttagtgcctaaca 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgtcaatattggattgcaaagccatgcaagcaatttacacaaaagatttagtgcctaaca 540
Query: 937 gaataacatcatctcaaaggctgttctcagaagctataggaaattttcaatgttcagatg 996
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaataacatcatctcaaaggctgctctcagaagctataggaaattttcaatgttcagatg 600
Query: 997 atcaagtaacgctagaggtgacaagtgaatcacttataattaaaaattttggcgataccc 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atcaagtaacgctagaggtgacaagtgaatcacttataattaaaaattttggcgataccc 660
Query: 1057 ctacagacctttcaaggattattagaagtcaagtcacaattaaaccgtttgagttcagca 1116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctacagacctttcaaggattattagaagtcaagtcacaattaaaccgtttgagttcagca 720
Query: 1117 gttatacta 1125
|||||||||
Sbjct: 721 gttatacta 729
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 384,739
Number of extensions: 22059
Number of successful extensions: 22059
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 22059
Number of HSP's successfully gapped: 1
Length of query: 2161
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2144
Effective length of database: 8,119,229
Effective search space: 17407626976
Effective search space used: 17407626976
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)