BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15445 (UTR included)
(1840 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2392_C1 2196 0.0
>BF14_2392_C1
Length = 1137
Score = 2196 bits (1108), Expect = 0.0
Identities = 1121/1124 (99%), Gaps = 1/1124 (0%)
Strand = Plus / Plus
Query: 518 ttttgacgatggtaatccgagggactatggaggcggcaggagaactgtgggcggccgtcc 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ttttgacgatggtaatccgagggactatggaggcggcaggagaactgtgggcggccgtcc 61
Query: 578 tctcccaaccgaaccaccatacaaggcctacgttgggaacttaccctctggtctcattca 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tctcccaaccgaaccaccatacaaggcctacgttgggaacttaccctctggtctcattca 121
Query: 638 aggcgatattaacagaatctttccaaatctggccgttaaaaatgtccggctggttatgga 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aggcgatattaacagaatctttccaaatctggccgttaaaaatgtccggctggttatgga 181
Query: 698 taaggaaacagatctattcaaaggattttgctatgtggaatttgagtatctcaatgatct 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 taaggaaacagatctattcaaaggattttgctatgtggaatttgagtatctcaatgatct 241
Query: 758 cataaaagcaatcgaaatgaatggttctctaaaggtagatgataaatttgtaaaaattga 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 cataaaagcaatcgaaatgaatggttctctaaaggtagatgataaatttgtaaaaattga 301
Query: 818 tgttgcggaagaaaaaaggaatgatagaggaggtggcttcgatcggggcagacgcgaggg 877
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 302 tgttgcggaagaaaaaaggaatgatagaggaggtggcttcgatcggggaagacgcgaggg 361
Query: 878 tcgtgatggcgggagggacggtcgtggtgggttccggcgagagggaggtggccgtggtac 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tcgtgatggcgggagggacggtcgtggtgggttccggcgagagggaggtggccgtggtac 421
Query: 938 gtacgacgacaggaggaccccggggttcacacatgaacgcgagcgtggcggcggggcgag 997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gtacgacgacaggaggaccccggggttcacacatgaacgcgagcgtggcggcggggcgag 481
Query: 998 cggggagcgatggaacgaccgtggcggggagcggccggagcgcgggggtgagaggtggaa 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cggggagcgatggaacgaccgtggcggggagcggccggagcgcgggggtgagaggtggaa 541
Query: 1058 tgagcgcggcggggagaggggtgcgagagggggcagtgaggaaccccgcgggggagactg 1117
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 542 tgagcgcggcggggagaggggtgcgagagggggcagcgaggaaccccgcgggggagactg 601
Query: 1118 ggggaggatggggagacagccgtcagcacccaggcagcagccacgtcgctttgacgacat 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ggggaggatggggagacagccgtcagcacccaggcagcagccacgtcgctttgacgacat 661
Query: 1178 gccgccagccagagccgacacatcaggtagaccgaagctggtactggagccgcggacggt 1237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gccgccagccagagccgacacatcaggtagaccgaagctggtactggagccgcggacggt 721
Query: 1238 gaaggagcctgtcaactcgctggctgccacaagccaggcctcctctatattcggcggcgc 1297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gaaggagcctgtcaactcgctggctgccacaagccaggcctcctctatattcggcggcgc 781
Query: 1298 ccggccgagggaggaacgactcaaagaactcgccgaggaatagtcccatcgaccccaaac 1357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 ccggccgagggaggaacgactcaaagaactcgccgaggaatagtcccatcgaccccaaac 841
Query: 1358 tcctctgtgtatatgtatcgcccatacttccatactaaattcgaccttgtacatgaaccg 1417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 tcctctgtgtatatgtatcgcccatacttccatactaaattcgaccttgtacatgaaccg 901
Query: 1418 gttttttttgttaggttgtgaagttgtaaatcattttttttaatagctctactgtaacgc 1477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 gttttttttgttaggttgtgaagttgtaaatcattttttttaatagctctactgtaacgc 961
Query: 1478 ttgttcaaggcatctttttaaatttgctagtttctcgtccgggcttgtgtgtatgatatt 1537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 ttgttcaaggcatctttttaaatttgctagtttctcgtccgggcttgtgtgtatgatatt 1021
Query: 1538 tgctttcatatctaaattcaactataattcactttgggtgatataaagatatttttattg 1597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 tgctttcatatctaaattcaactataattcactttgggtgatataaagatatttttattg 1081
Query: 1598 -ttttttttttctccagtttgcttcttttgagaattaaatgaaa 1640
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 tttttttttttctccagtttgcttcttttgagaattaaatgaaa 1125
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 304,613
Number of extensions: 7591
Number of successful extensions: 7591
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7590
Number of HSP's successfully gapped: 1
Length of query: 1840
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1823
Effective length of database: 8,119,229
Effective search space: 14801354467
Effective search space used: 14801354467
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)