BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15446 (UTR included)
(1906 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01024B1B03 1398 0.0
BF01014B1D08 371 e-102
>BF01024B1B03
Length = 739
Score = 1398 bits (705), Expect = 0.0
Identities = 726/733 (99%)
Strand = Plus / Plus
Query: 748 atccaagagtcagacagaggtattgggcaagaaattttgtaggctggcctagatttagtg 807
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atccaagagtcagacagaggtattgggcaagaaattttgtaggctggcctagatttagtt 60
Query: 808 ctataaagcctaatgcaacacatcatgttattagagaccttgaaaagataggaaaagtat 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctataaagcctaatgcaacacatcatgttattagagaccttgaaaagataggaaaagtat 120
Query: 868 cttcagtggttacacagaatgtcgatagacttcaccacaaagctggttcaatgaatgtta 927
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 121 cttcagtggttacacagaatgtcgatagacttcaccataaagctggttcaatgaatgtta 180
Query: 928 ttgaactccatggctcaggttatattgtgaaatgtttaaattgcccatatgaaatagatc 987
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 181 ttgaactccatggctcaggttatattgtgaaatgtttaaattgtccatatgaaatagatc 240
Query: 988 gttttaagttgcaagatatattaatgaaaaacaatcctagtatgaaaagcagctttgata 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gttttaagttgcaagatatattaatgaaaaacaatcctagtatgaaaagcagctttgata 300
Query: 1048 tgataaggccagatggggatgtggagctatctaaagaacaagtggaaaatttcagaactc 1107
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 301 tgataaggccagatggggatgtggagctatctaaagaacaagtggaaagtttcagaactc 360
Query: 1108 ctctttgtccggaatgtgaaggtcctttaaaacctgacatagtattctttggagataatg 1167
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 361 ctctttgtccggaatgtgaaggtcctttaaaacctgacatagtattctttggagataacg 420
Query: 1168 taccaaagcaaagagtggaacaagttaggaatgaagttagttgtagtgatgctgtatttg 1227
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 421 taccaaagcaaagagtggaacaagttaggaatgaagttagttgtagtgatgcagtatttg 480
Query: 1228 tacttggctccagtttaactgtctattcaagttataggataattctccaggccaaagaag 1287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tacttggctccagtttaactgtctattcaagttataggataattctccaggccaaagaag 540
Query: 1288 aagggaaagaagtagccattttaaatataggtcctacaagagcagatgatatggctgatc 1347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aagggaaagaagtagccattttaaatataggtcctacaagagcagatgatatggctgatc 600
Query: 1348 ttaaagtttcaaccaagtgtggtgacattctagtagatatatgcaaaacaattatgtgac 1407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttaaagtttcaaccaagtgtggtgacattctagtagatatatgcaaaacaattatgtgac 660
Query: 1408 cttgctatagaacaaatgttacattctgatccattaaatgaatttaattcaaataaatgc 1467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cttgctatagaacaaatgttacattctgatccattaaatgaatttaattcaaataaatgc 720
Query: 1468 attgcaaagaaaa 1480
||||||||||||
Sbjct: 721 gttgcaaagaaaa 733
>BF01014B1D08
Length = 794
Score = 371 bits (187), Expect = e-102
Identities = 206/211 (97%), Gaps = 1/211 (0%)
Strand = Plus / Minus
Query: 1696 tatcgataatcaattagtcagacaatttttttttttttaaatttacttacatctaatgtt 1755
|||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||
Sbjct: 794 tatcgataatcaattagtcagacaatttattttttta-aattttacttacatctaatgtt 736
Query: 1756 aatgtctttaacctcagtgtacatatgaggtgtcaatataaaggataaaatggttattat 1815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 aatgtctttaacctcagtgtacatatgaggtgtcaatataaaggataaaatggttattat 676
Query: 1816 aatggttacactatgacagggaattaaaaatatatttccctatcatcatagtaactaatt 1875
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 675 aatggttacactatgacaggaaattaaaaatatatttccctatcatcatagtaactaatt 616
Query: 1876 ctgttcaggattatcttttgctacacttgtc 1906
|||||||||||||||||||||||||||||||
Sbjct: 615 ctgttcaggattatcttttgctacacttgtc 585
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 340,159
Number of extensions: 34217
Number of successful extensions: 34217
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 34215
Number of HSP's successfully gapped: 2
Length of query: 1906
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1889
Effective length of database: 8,119,229
Effective search space: 15337223581
Effective search space used: 15337223581
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)