BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15447 (UTR included)
(2308 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1520_C1 1209 0.0
BF14_903_C1 640 0.0
>BF14_1520_C1
Length = 810
Score = 1209 bits (610), Expect = 0.0
Identities = 622/626 (99%)
Strand = Plus / Plus
Query: 528 gggggttgcttcgggtctacccagaagagaactatagtgggtggctgggcgtgggcctgg 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gggggttgcttcgggtctacccagaagagaactatagtgggtggctgggcgtgggcctgg 244
Query: 588 tgtctcgtgactgatgttcaacgtatctcacttgaggttatgacattgaacccaatgtgt 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tgtctcgtgactgatgttcaacgtatctcacttgaggttatgacattgaacccaatgtgt 304
Query: 648 gagtatgtggaaacagcccagggtgttcccttaactgtgaccggagtcgcgcaatgtaag 707
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 305 gagtatgtggaaacagcccagggtgttcccttaactgtaaccggagtcgcgcaatgtaag 364
Query: 708 atcatgaacgaggatgagttgctcaccaccgcctgcgaacagttcctggggaaaactgtg 767
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 atcatgaacgaggatgagctgctcaccaccgcctgcgaacagttcctggggaaaactgtg 424
Query: 768 aaagagatcaagatgacaatccttcaaaccctcgaaggccacttgcgtgctatattagga 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 aaagagatcaagatgacaatccttcaaaccctcgaaggccacttgcgtgctatattagga 484
Query: 828 acgcttacagtcgaagaggtgtacaaagacagggaccagtttgctggccttgttcgggaa 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 acgcttacagtcgaagaggtgtacaaagacagggaccagtttgctggccttgttcgggaa 544
Query: 888 gtcgcagcaccggacgtgggtcggatgggcatcgagatattgtccttcacgatcaaggac 947
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 545 gtcgcagcaccggacgtgggtcgaatgggcatcgagatattgtccttcacgatcaaggac 604
Query: 948 gtctacgatgacgtccagtacttagccagcttgggcaagtcgcagacggcggtggtgaag 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 gtctacgatgacgtccagtacttagccagcttgggcaagtcgcagacggcggtggtgaag 664
Query: 1008 agggatgctgatatcggagtcgcacaggccaatagagatgcggggataagagaagcggag 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 agggatgctgatatcggagtcgcacaggccaatagagatgcggggataagagaagcggag 724
Query: 1068 tgcgagaaaagtgcaatggatgtaaaatattctatggacacgaaaatagaagacaacact 1127
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 tgcgagaaaagtgcaatggatgtaaaatattctatggacacgaaaatagaagacaacacc 784
Query: 1128 agacttttcaaactacaaaaggcaca 1153
||||||||||||||||||||||||||
Sbjct: 785 agacttttcaaactacaaaaggcaca 810
>BF14_903_C1
Length = 617
Score = 640 bits (323), Expect = 0.0
Identities = 355/363 (97%), Gaps = 4/363 (1%)
Strand = Plus / Plus
Query: 1950 atttaaaactttttgttcgttaataaccgtaatgtcaggc-tttttcaatgtacttgaca 2008
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 atttaaaactttttgttcgttaataaccgtaatgtcannnntttttcaatgtacttgaca 60
Query: 2009 aataacaaaaaaaccgatatctattttagtatttaatgtcataaatt--aaaaaaaaaat 2066
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 61 aataacaaaaaaaccgatatctattttagtatttaatgtcataaatttaaaaaaaaaaat 120
Query: 2067 gtcttctatataatctttgtggatgtagacttgtagcgttagattttgtactttatctaa 2126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcttctatataatctttgtggatgtagacttgtagcgttagattttgtactttatctaa 180
Query: 2127 aaaagtaaacagagtgttctatagcactgccttcttgtagacacgttaactataccttct 2186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaaagtaaacagagtgttctatagcactgccttcttgtagacacgttaactataccttct 240
Query: 2187 tt-aaaattataataaagtcacattcaaaacgtcttctttatagatccttaataagtata 2245
|| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttaaaaattataataaagtaacattcaaaacgtcttctttatagatccttaataagtata 300
Query: 2246 gttgtgttagtgttgtaccaatgtaccaatgatatatcaagaacaaatgttgtaaaatct 2305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gttgtgttagtgttgtaccaatgtaccaatgatatatcaagaacaaatgttgtaaaatct 360
Query: 2306 tag 2308
|||
Sbjct: 361 tag 363
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 264,957
Number of extensions: 5579
Number of successful extensions: 5579
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5575
Number of HSP's successfully gapped: 2
Length of query: 2308
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2291
Effective length of database: 8,119,229
Effective search space: 18601153639
Effective search space used: 18601153639
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)