BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15469 (UTR included)
(4474 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056A1H09 1437 0.0
BF01034A2C01 107 2e-22
>BF01056A1H09
Length = 760
Score = 1437 bits (725), Expect = 0.0
Identities = 752/760 (98%), Gaps = 1/760 (0%)
Strand = Plus / Plus
Query: 3357 gcgtacagcaatagacttaaatgtgccaatgaaactgtagcaaaggcagcacttaatata 3416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgtacagcaatagacttaaatgtgccaatgaaactgtagcaaaggcagcacttaatata 60
Query: 3417 aataaaatgaaactgtcagaaagctcttcggatcaatggattacgactgtgtgcagtccg 3476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aataaaatgaaactgtcagaaagctcttcggatcaatggattacgactgtgtgcagtccg 120
Query: 3477 gaacccgaagatgcggccgttttccttaatacaaagatggaattatctgaagacgcttct 3536
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 121 gaacccgaagatgcggccgttttccttaatacaaagttggaattatctgaagacgcttct 180
Query: 3537 aagactttgaacaataaagacgaagctgtggttgtgctagctgtgattaaaattttaaaa 3596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagactttgaacaataaagacgaagctgtggttgtgctagctgtgattaaaattttaaaa 240
Query: 3597 caggcgggtatatcagcgtcagatataggggtgatagctccgtaccgtgatcaggtcact 3656
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 241 caggcgggtatatcagcgtcagatataggggtgatagctccgtaccgtgatcaagtcact 300
Query: 3657 ttgctgaaacgcgtcctggacggtacacaagtcgaagccagtactgtagatcagttccaa 3716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgctgaaacgcgtcctggacggtacacaagtcgaagccagtactgtagatcagttccaa 360
Query: 3717 ggcagagataaaagtgtcataatatactcttgtacaagaaaagatgataatttaagaaaa 3776
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 361 ggcagagataaaagtgtcataatatattcttgtacaagaaaagatgataatttaagaaaa 420
Query: 3777 gtcaaggataacgaagtcctgaacgacaaacgtcgtctggcggttagcgtgacgcgtgcg 3836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtcaaggataacgaagtcctgaacgacaaacgtcgtctggcggttagcgtgacgcgtgcg 480
Query: 3837 aaacacaagtttattgtgatcggtaacattcgcgcattgaaaagatacactacgataatg 3896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaacacaagtttattgtgatcggtaacattcgcgcattgaaaagatacactacgataatg 540
Query: 3897 aaactagaagaggcttgtaagactgttgatttggatgaagaggttgttacaaacctgaat 3956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaactagaagaggcttgtaagactgttgatttggatgaagaggttgttacaaacctgaat 600
Query: 3957 aataaatatgggttctgaatgtcatggttacattgttataattattataagaaatggcta 4016
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 601 aataaatatgggttctgaatgtcatggttacattgttataattattacaagaaatggcaa 660
Query: 4017 aattattttttgtttgtgtaaaatcagatatcatgttcgtttgaaattaccaaa-aaaaa 4075
||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 661 aattattttgtgtttgtgtaaaatcagatatcatgttcgtttgaaattaccaaannaaaa 720
Query: 4076 ttatcatgtgattttattttattataggtttattattata 4115
||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ttatcatgtgattttattttattataggtttattattata 760
>BF01034A2C01
Length = 794
Score = 107 bits (54), Expect = 2e-22
Identities = 54/54 (100%)
Strand = Plus / Minus
Query: 45 aatttcgggtggtgcttgatgttctggtcttcgagccattttgataccgtagtt 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 aatttcgggtggtgcttgatgttctggtcttcgagccattttgataccgtagtt 40
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 612,627
Number of extensions: 15166
Number of successful extensions: 15166
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 15165
Number of HSP's successfully gapped: 2
Length of query: 4474
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4456
Effective length of database: 8,109,745
Effective search space: 36137023720
Effective search space used: 36137023720
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)