BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15473 (UTR included)
(1330 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01058B2D02 775 0.0
>BF01058B2D02
Length = 426
Score = 775 bits (391), Expect = 0.0
Identities = 394/395 (99%)
Strand = Plus / Plus
Query: 555 tgcatcatcgattttggtaaaatggctgaaaaacttattcctgtggtgaaggctgatgaa 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 tgcatcatcgattttggtaaaatggctgaaaaacttattcctgtggtgaaggctgatgaa 69
Query: 615 gaagaagaggaggaattagtggaccctcagcaggcgttgagggatgaatgtagccaaaag 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 gaagaagaggaggaattagtggaccctcagcaggcgttgagggatgaatgtagccaaaag 129
Query: 675 caggaggctcaaagcttctggacaaaataccaagaatgcaataatcgtgtgaattcaaaa 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 caggaggctcaaagcttctggacaaaataccaagaatgcaataatcgtgtgaattcaaaa 189
Query: 735 tcaaacaccgcagagacctgtgaagaggaactcatagattacgttcatgcccttgacaag 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tcaaacaccgcagagacctgtgaagaggaactcatagattacgttcatgcccttgacaag 249
Query: 795 tgtgtcaacaaagacctcttcaagcggcttaagtagatttagcttagtttcctaccattt 854
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 250 tgtgtcaacaaagacctcttcaagcggcttaagtagatttagtttagtttcctaccattt 309
Query: 855 tgccaccatgttcagtagatcaataggaaattatttaataaatgctattcagtgtgtttg 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tgccaccatgttcagtagatcaataggaaattatttaataaatgctattcagtgtgtttg 369
Query: 915 agtttataatgtaaataaataatcattttgttcca 949
|||||||||||||||||||||||||||||||||||
Sbjct: 370 agtttataatgtaaataaataatcattttgttcca 404
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 229,653
Number of extensions: 6272
Number of successful extensions: 6272
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6272
Number of HSP's successfully gapped: 1
Length of query: 1330
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1313
Effective length of database: 8,119,229
Effective search space: 10660547677
Effective search space used: 10660547677
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)