BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15484 (UTR included)
(2755 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026B1C08 1390 0.0
>BF01026B1C08
Length = 733
Score = 1390 bits (701), Expect = 0.0
Identities = 725/733 (98%)
Strand = Plus / Plus
Query: 780 ctattctttgtaccaaggaggagcgagctgtgtgaaaaacatctcaaaaatcgaggtgtt 839
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1 ctattctttgtaccaaggaggagcgagctgtgtgaaaaacatctcaaaaatcgaggcgtt 60
Query: 840 ctgggaacactttctattgaagagtttagatgtgatatatttccctttgatagtgatgta 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgggaacactttctattgaagagtttagatgtgatatatttccctttgatagtgatgta 120
Query: 900 atgtcactggaactacaaaatgattttagagaaaattacttggaaggtgatccgacttgt 959
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgtctctggaactacaaaatgattttagagaaaattacttggaaggtgatccgacttgt 180
Query: 960 ctgtataatgcagctcaagctatacgcaccatccagcaattatacggaatcataccaaga 1019
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 181 ctgtataatgcagctcaagctatacgcaccatccagcaactatacggaatcataccaaga 240
Query: 1020 gtttatggaaaaggagaagctgctaaacaagtatgggatcttctctgtagattgaataag 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtttatggaaaaggagaagctgctaaacaagtatgggatcttctctgtagattgaataag 300
Query: 1080 gaagaacagggtagtccgcgaggtgcctcaacttcctgtatcgatcagctattgttgctc 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaagaacagggtagtccgcgaggtgcctcaacttcctgtatcgatcagctattgttgctc 360
Query: 1140 gatagagccattgacttcaccagtgtcatggccactcaactcacatatgaaggacttatt 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gatagagccattgacttcaccagtgtcatggccactcaactcacatatgaaggacttatt 420
Query: 1200 gatgagttgtacggtataaggagttctactgtcacatttccgggtcacaagtttgttagc 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gatgagttgtacggtataaggagttctactgtcacatttccgggtcacaagtttgttagc 480
Query: 1260 ccggatgacgctagaccggaagtaacagccagagaaaaaaagagaatcatactcaactcc 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccggatgacgctagaccggaagtaacagccagagaaaaaaagagaatcatactcaactcc 540
Query: 1320 agcgaagaactgtttgctgagctgagagattgtaacttcacatcggtgggagcacaattg 1379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agcgaagaactgtttgctgagctgagagattgtaacttcacatcggtgggagcacaattg 600
Query: 1380 tcaaagaaagcaagaattatcaagacccaattggacgaaagacacaatgacaaatcagtt 1439
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 601 tcaaagaaagcaagaattatcaagacccaattggatgaaagacacaatgacaaatcagtt 660
Query: 1440 caggagataaaacagtttgtctcccgtctgccacagatgttagcaaacaaacaatcattg 1499
|||||||||||||| || ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 661 caggagataaaacaattcgtctctcgtctcccacagatgttagcaaacaaacaatcattg 720
Query: 1500 gcaacgcatacag 1512
|||||||||||||
Sbjct: 721 gcaacgcatacag 733
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 329,030
Number of extensions: 6101
Number of successful extensions: 6101
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6101
Number of HSP's successfully gapped: 1
Length of query: 2755
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2738
Effective length of database: 8,119,229
Effective search space: 22230449002
Effective search space used: 22230449002
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)