BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15493 (UTR included)
(2014 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C2 90 2e-17
BF14_729_C3 82 4e-15
BF01011A1H06 76 2e-13
BF01019B1G10 72 4e-12
BF01025A1D01 72 4e-12
BF01024A1H07 72 4e-12
BF01012A1B09 72 4e-12
>BF14_729_C2
Length = 1289
Score = 89.7 bits (45), Expect = 2e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 27 aaaaactacatactcaagacgtttcggttacttttcagcaaccgtgattacgggcag 83
||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 590 aaaaactacatactcccgacgtttcggttacttttcagcaaccgtgatcacgggcag 534
>BF14_729_C3
Length = 2041
Score = 81.8 bits (41), Expect = 4e-15
Identities = 71/80 (88%), Gaps = 2/80 (2%)
Strand = Plus / Minus
Query: 4 actacgcgtatttgattatttaaaaaaactacatactcaagacgtttcggttacttttca 63
|||||||| |||| |||||||||||| ||||||| || ||||||||||||||||| ||
Sbjct: 1671 actacgcggattttattatttaaaaa--ctacataatcccgacgtttcggttactttgca 1614
Query: 64 gcaaccgtgattacgggcag 83
||||||||||| ||||||||
Sbjct: 1613 gcaaccgtgatcacgggcag 1594
>BF01011A1H06
Length = 739
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 26 aaaaaactacatactcaagacgtttcggttacttttcagcaaccgtgattacgggcag 83
|||| ||||||||||| ||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 523 aaaagactacatactcccgacgtttcggttacttttcagtaaccgtgatcacgggcag 466
>BF01019B1G10
Length = 488
Score = 71.9 bits (36), Expect = 4e-12
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 4 actacgcgtatttgattatttaaaaaaactacatactcaagacgtttcggttacttttca 63
|||||||| |||| ||||||| |||| |||||||| || |||||||||||| |||||||
Sbjct: 319 actacgcgaattttattattttaaaa-actacataatcccgacgtttcggttccttttca 377
Query: 64 gcaaccgtgattacgggcag 83
| ||||||||| ||||||||
Sbjct: 378 gtaaccgtgatcacgggcag 397
>BF01025A1D01
Length = 764
Score = 71.9 bits (36), Expect = 4e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 44 gacgtttcggttacttttcagcaaccgtgattacgggcag 83
||||||||||||||||||||||||||||||| ||||||||
Sbjct: 439 gacgtttcggttacttttcagcaaccgtgatcacgggcag 478
>BF01024A1H07
Length = 726
Score = 71.9 bits (36), Expect = 4e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 44 gacgtttcggttacttttcagcaaccgtgattacgggcag 83
||||||||||||||||||||||||||||||| ||||||||
Sbjct: 692 gacgtttcggttacttttcagcaaccgtgatcacgggcag 653
>BF01012A1B09
Length = 841
Score = 71.9 bits (36), Expect = 4e-12
Identities = 69/79 (87%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 3 cactacgcgtatttgattatttaaaaaaactacatactcaagacgtttcggttacttttc 62
||||||||| |||| ||||||| |||| ||||||| || |||||||||||||||||||
Sbjct: 765 cactacgcggattttattattttaaaa--ctacataatcccgacgtttcggttacttttc 822
Query: 63 agcaaccgtgattacgggc 81
|||| ||||||| ||||||
Sbjct: 823 agcagccgtgatcacgggc 841
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 338,974
Number of extensions: 24098
Number of successful extensions: 24098
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 24097
Number of HSP's successfully gapped: 7
Length of query: 2014
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1997
Effective length of database: 8,119,229
Effective search space: 16214100313
Effective search space used: 16214100313
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)