BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15500 (UTR included)
(1927 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026B2C12 1473 0.0
BF01052A1A04 630 e-180
>BF01026B2C12
Length = 771
Score = 1473 bits (743), Expect = 0.0
Identities = 756/760 (99%), Gaps = 1/760 (0%)
Strand = Plus / Plus
Query: 643 tgaagatcgacaacaacccgttcgcgaaaggatttagagacaccggcgctggaaagagag 702
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 tgaagatcgaca-caacccgttcgcgaaaggatttagagacaccggcgctggaaagagag 71
Query: 703 aaaagaatttgtccgtgtaccgcaggcaggcgctgttgacggcgcggtcggacgcgcgtg 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 aaaagaatttgtccgtgtaccgcaggcaggcgctgttgacggcgcggtcggacgcgcgtg 131
Query: 763 atgatgatgacgagaggcctctggatgtaggaggaccgtccagcccgccgccgcctccca 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 atgatgatgacgagaggcctctggatgtaggaggaccgtccagcccgccgccgcctccca 191
Query: 823 cctgctccacaacatcctggttcagttcgagcggcggtgtcgactctggcgctgatgagg 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 cctgctccacaacatcctggttcagttcgagcggcggtgtcgactctggcgctgatgagg 251
Query: 883 ctggttctgattcctcgtgctctggaggtggtcgtgctccatctcctcccgctggaccgt 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ctggttctgattcctcgtgctctggaggtggtcgtgctccatctcctcccgctggaccgt 311
Query: 943 caagaccctcgccagcaccggacgtatcactcggacctcccgtacaaccgcccctgctgc 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 caagaccctcgccagcaccggacgtatcactcggacctcccgtacaaccgcccctgctgc 371
Query: 1003 cgtatctctacccgccgtcgctgtatccgccgcccttcttccctcaccaccagatgcctc 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 cgtatctctacccgccgtcgctgtatccgccgcccttcttccctcaccaccagatgcctc 431
Query: 1063 cgggtctgctcttcaacctgcatcctcttctgcagcagtactctctgcccccgccaccgg 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 cgggtctgctcttcaacctgcatcctcttctgcagcagtactctctgcccccgccaccgg 491
Query: 1123 ccccaccggtcccatcccccgcgccctcgatcagtaagactcacaggttcgctccgtatg 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ccccaccggtcccatcccccgcgccctcgatcagtaagactcacaggttcgctccgtatg 551
Query: 1183 ccctgccagggttaggttccgcgttcgagcaggtcgctccccgggctcgctctctcagtt 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ccctgccagggttaggttccgcgttcgagcaggtcgctccccgggctcgctctctcagtt 611
Query: 1243 cgtccccagcgcgggtcgccggcgggggctcgggggccggaggtcgctcgccccctacgc 1302
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 612 cgtccccagcgcgggtcgccggcgggggctcgggggccggnnntcgctcgccccctacgc 671
Query: 1303 gcgcggcttccgcggaccctcccgcggatgcgccgtcttccacgacgtccgccacgccgc 1362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gcgcggcttccgcggaccctcccgcggatgcgccgtcttccacgacgtccgccacgccgc 731
Query: 1363 cctcatccgaccttaagagcatcgagcgcatggtcaacgg 1402
||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 cctcatccgaccttaagagcatcgagcgcatggtcaacgg 771
>BF01052A1A04
Length = 815
Score = 630 bits (318), Expect = e-180
Identities = 330/334 (98%)
Strand = Plus / Plus
Query: 1594 cgatcacccagtgacttgcacgacctcccacacatccatacacacagctaaactttctaa 1653
||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 1 cgatcaccctttgacttgcacgacctcccacacatccatacacccagctaaactatctaa 60
Query: 1654 ccgtaccccggcaagacggacattttgtttctttaaattctaaagatatatttttgatac 1713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccgtaccccggcaagacggacattttgtttctttaaattctaaagatatatttttgatac 120
Query: 1714 atacagttacgattctttaaataatgttcaatattaaagtctatggtgagatgggagcgt 1773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atacagttacgattctttaaataatgttcaatattaaagtctatggtgagatgggagcgt 180
Query: 1774 tcgaggcattttgtttcgtgcataattattttttttctatgtattacgttacaactactt 1833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcgaggcattttgtttcgtgcataattattttttttctatgtattacgttacaactactt 240
Query: 1834 ctgtgtgttgctatatagcgggtgaggagttggacagcttgtagcacagattatgcaatg 1893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgtgtgttgctatatagcgggtgaggagttggacagcttgtagcacagattatgcaatg 300
Query: 1894 agacgagtgacgtcatatcccgaacaagtagtat 1927
||||||||||||||||||||||||||||||||||
Sbjct: 301 agacgagtgacgtcatatcccgaacaagtagtat 334
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 200,554
Number of extensions: 4054
Number of successful extensions: 4054
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4053
Number of HSP's successfully gapped: 2
Length of query: 1927
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1910
Effective length of database: 8,119,229
Effective search space: 15507727390
Effective search space used: 15507727390
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)