BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15501 (UTR included)
(3493 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054A2H09 517 e-146
>BF01054A2H09
Length = 730
Score = 517 bits (261), Expect = e-146
Identities = 276/281 (98%)
Strand = Plus / Plus
Query: 2374 tgtgtgacgtcacgcctcacggagtactctgctttctaccctcctaccggctcatgaacc 2433
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 12 tgtgtgacgtcacgcctcacggagtactttgctttctaccctcctaccggctcatgaacc 71
Query: 2434 tgctcgttaaaagatggcgttactcgcatttatgggagagattggaggcaaaaaaacacg 2493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 tgctcgttaaaagatggcgttactcgcatttatgggagagattggaggcaaaaaaacacg 131
Query: 2494 tcttcgttgagagcactcacatgaaaactcacgtaaacatgatgaaggcattcgataatt 2553
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 132 tcttcgttgagagcactcacatgaaaactcacgtaaacatgatgaaggcattcgataact 191
Query: 2554 gcgtgggaacagatcgaggggcgctactgctggccgtgtaccgcgggaaggtagctgagg 2613
||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 192 gcgtgggaacagatcgaggggcgttactgctggccgtgtaccgcgggaaggtagccgagg 251
Query: 2614 gtatggacttcaaagaccaccaggctagagctgttatagct 2654
|||||||||||||||||||||||||||||| ||||||||||
Sbjct: 252 gtatggacttcaaagaccaccaggctagagttgttatagct 292
Score = 262 bits (132), Expect = 3e-69
Identities = 132/132 (100%)
Strand = Plus / Plus
Query: 2655 ataggaattccttaccccagtaaagacagggctgtcgaagaaaaaatgaagtacaacgat 2714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 ataggaattccttaccccagtaaagacagggctgtcgaagaaaaaatgaagtacaacgat 658
Query: 2715 aaatattcgaaaaacaggaatctgttaaatggacgggaatggttgaaaatacaagcttat 2774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 aaatattcgaaaaacaggaatctgttaaatggacgggaatggttgaaaatacaagcttat 718
Query: 2775 agggcgttgaat 2786
||||||||||||
Sbjct: 719 agggcgttgaat 730
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 402,073
Number of extensions: 8514
Number of successful extensions: 8514
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8514
Number of HSP's successfully gapped: 2
Length of query: 3493
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3475
Effective length of database: 8,109,745
Effective search space: 28181363875
Effective search space used: 28181363875
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)