BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15504 (UTR included)
(1606 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1941_C1 1544 0.0
>BF14_1941_C1
Length = 783
Score = 1544 bits (779), Expect = 0.0
Identities = 782/783 (99%)
Strand = Plus / Plus
Query: 407 tattttttcgatactagcagttgtcgatcaattattaccattatcatcaaacacatgacc 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tattttttcgatactagcagttgtcgatcaattattaccattatcatcaaacacatgacc 60
Query: 467 agttaggggagttgtcacacatatataataagaaatggcccgcgagtttgatcatctttt 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agttaggggagttgtcacacatatataataagaaatggcccgcgagtttgatcatctttt 120
Query: 527 taaactgctgattatcggtgacagtggtgtaggaaaaagctgtctccttctccgttttgc 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taaactgctgattatcggtgacagtggtgtaggaaaaagctgtctccttctccgttttgc 180
Query: 587 ggacaacactttctccggtagttatattacaacgatcggtgtggatttcaaaataagaac 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggacaacactttctccggtagttatattacaacgatcggtgtggatttcaaaataagaac 240
Query: 647 tttagagataaatggtgaaagagttaaacttcagatatgggatacagccgggcaagagag 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttagagataaatggtgaaagagttaaacttcagatatgggatacagccgggcaagagag 300
Query: 707 gtttagaacgatcacgagcacgtactatagagggactcacggtgtcatcgtggtatacga 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtttagaacgatcacgagcacgtactatagagggactcacggtgtcatcgtggtatacga 360
Query: 767 tgtcactaatggggagtcgtttgctaatgtgaagaggtggttgcacgagatcgaacaaaa 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtcactaatggggagtcgtttgctaatgtgaagaggtggttgcacgagatcgaacaaaa 420
Query: 827 ttgtgatgtcgtcaacaaagtactagttggtaataaaaacgattgtccatcaagaaaagt 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttgtgatgtcgtcaacaaagtactagttggtaataaaaacgattgtccatcaagaaaagt 480
Query: 887 agtcgtgacggaggatgctcaaagatttgcaaatcaaatgaacataccattgtttgagac 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agtcgtgacggaggatgctcaaagatttgcaaatcaaatgaacataccattgtttgagac 540
Query: 947 aagtgctaaagaaaacatcaatgtagaggaaatgtttctaactattacaaaaatggttct 1006
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gagtgctaaagaaaacatcaatgtagaggaaatgtttctaactattacaaaaatggttct 600
Query: 1007 aaggtctaagttggaaatgaaggagagacaaaatgtaacagcaaacgacacagtaaactt 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaggtctaagttggaaatgaaggagagacaaaatgtaacagcaaacgacacagtaaactt 660
Query: 1067 aaagaagagccacaaagggaagaaaaaatgttgccactgacctaatggtatggcagtcgg 1126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aaagaagagccacaaagggaagaaaaaatgttgccactgacctaatggtatggcagtcgg 720
Query: 1127 ggatgtcacttatataatgctcaaatgttgagagaaagttgcacaacccttgcaggactg 1186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ggatgtcacttatataatgctcaaatgttgagagaaagttgcacaacccttgcaggactg 780
Query: 1187 gta 1189
|||
Sbjct: 781 gta 783
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 220,717
Number of extensions: 4789
Number of successful extensions: 4789
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4789
Number of HSP's successfully gapped: 1
Length of query: 1606
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1589
Effective length of database: 8,119,229
Effective search space: 12901454881
Effective search space used: 12901454881
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)